Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPS3AP61247 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.07■□□□□ 0.32
RPS3AP61247 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RPS3AP61247 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.07■□□□□ 0.32
RPS3AP61247 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RPS3AP61247 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RPS3AP61247 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RPS3AP61247 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.07■□□□□ 0.32
RPS3AP61247 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPS3AP61247 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
RPS3AP61247 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
RPS3AP61247 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPS3AP61247 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RPS3AP61247 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RPS3AP61247 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.07■□□□□ 0.32
RPS3AP61247 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RPS3AP61247 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS3AP61247 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS3AP61247 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.06■□□□□ 0.32
RPS3AP61247 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
RPS3AP61247 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.06■□□□□ 0.32
RPS3AP61247 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS3AP61247 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS3AP61247 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPS3AP61247 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS3AP61247 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
RPS3AP61247 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS3AP61247 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPS3AP61247 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RPS3AP61247 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.06■□□□□ 0.32
RPS3AP61247 AL137013.1-201ENST00000432946 1228 ntBASIC17.06■□□□□ 0.32
RPS3AP61247 ATP5G1P1-201ENST00000448724 379 ntBASIC17.06■□□□□ 0.32
RPS3AP61247 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.06■□□□□ 0.32
RPS3AP61247 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
RPS3AP61247 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.06■□□□□ 0.32
RPS3AP61247 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.06■□□□□ 0.32
RPS3AP61247 AL512604.3-201ENST00000569583 964 ntBASIC17.06■□□□□ 0.32
RPS3AP61247 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS3AP61247 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RPS3AP61247 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.06■□□□□ 0.32
RPS3AP61247 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RPS3AP61247 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
RPS3AP61247 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.06■□□□□ 0.32
RPS3AP61247 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS3AP61247 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RPS3AP61247 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.05■□□□□ 0.32
RPS3AP61247 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS3AP61247 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS3AP61247 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RPS3AP61247 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RPS3AP61247 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.05■□□□□ 0.32
RPS3AP61247 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS3AP61247 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS3AP61247 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RPS3AP61247 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS3AP61247 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RPS3AP61247 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS3AP61247 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS3AP61247 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS3AP61247 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.05■□□□□ 0.32
RPS3AP61247 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS3AP61247 AL162727.3-201ENST00000635661 2787 ntBASIC17.05■□□□□ 0.32
RPS3AP61247 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS3AP61247 HMGA1P5-201ENST00000412453 271 ntBASIC17.05■□□□□ 0.32
RPS3AP61247 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPS3AP61247 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RPS3AP61247 SLC25A3P1-201ENST00000443844 931 ntBASIC17.05■□□□□ 0.32
RPS3AP61247 ECEL1P2-202ENST00000465689 757 ntBASIC17.05■□□□□ 0.32
RPS3AP61247 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.05■□□□□ 0.32
RPS3AP61247 AL353719.1-201ENST00000566847 864 ntBASIC17.05■□□□□ 0.32
RPS3AP61247 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS3AP61247 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS3AP61247 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RPS3AP61247 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.05■□□□□ 0.32
RPS3AP61247 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS3AP61247 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPS3AP61247 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS3AP61247 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.05■□□□□ 0.32
RPS3AP61247 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.05■□□□□ 0.32
RPS3AP61247 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.05■□□□□ 0.32
RPS3AP61247 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPS3AP61247 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.05■□□□□ 0.32
RPS3AP61247 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.04■□□□□ 0.32
RPS3AP61247 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPS3AP61247 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RPS3AP61247 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPS3AP61247 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RPS3AP61247 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPS3AP61247 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPS3AP61247 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPS3AP61247 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPS3AP61247 AC113347.1-201ENST00000413321 391 ntBASIC17.04■□□□□ 0.32
RPS3AP61247 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.04■□□□□ 0.32
RPS3AP61247 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.04■□□□□ 0.32
RPS3AP61247 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPS3AP61247 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
RPS3AP61247 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.04■□□□□ 0.32
RPS3AP61247 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
RPS3AP61247 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPS3AP61247 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms