Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN12P56749 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN12P56749 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN12P56749 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.85■□□□□ 0.13
CLDN12P56749 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN12P56749 AC233263.1-201ENST00000578059 224 ntBASIC15.85■□□□□ 0.13
CLDN12P56749 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN12P56749 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
CLDN12P56749 AL023875.1-201ENST00000640777 796 ntBASIC15.85■□□□□ 0.13
CLDN12P56749 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN12P56749 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN12P56749 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
CLDN12P56749 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CLDN12P56749 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN12P56749 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN12P56749 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN12P56749 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN12P56749 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN12P56749 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CLDN12P56749 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN12P56749 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN12P56749 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN12P56749 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CLDN12P56749 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN12P56749 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN12P56749 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN12P56749 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN12P56749 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN12P56749 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN12P56749 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN12P56749 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN12P56749 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN12P56749 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN12P56749 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN12P56749 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN12P56749 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN12P56749 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN12P56749 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN12P56749 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN12P56749 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CLDN12P56749 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN12P56749 KRASP1-201ENST00000407852 552 ntBASIC15.84■□□□□ 0.13
CLDN12P56749 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CLDN12P56749 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CLDN12P56749 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.84■□□□□ 0.13
CLDN12P56749 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.84■□□□□ 0.13
CLDN12P56749 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.84■□□□□ 0.13
CLDN12P56749 AC069544.1-201ENST00000609399 999 ntBASIC15.84■□□□□ 0.13
CLDN12P56749 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.84■□□□□ 0.13
CLDN12P56749 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN12P56749 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CLDN12P56749 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN12P56749 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN12P56749 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN12P56749 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN12P56749 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CLDN12P56749 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN12P56749 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN12P56749 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN12P56749 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN12P56749 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN12P56749 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN12P56749 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN12P56749 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN12P56749 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
CLDN12P56749 AL109659.2-201ENST00000606809 1674 ntBASIC15.83■□□□□ 0.13
CLDN12P56749 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.83■□□□□ 0.13
CLDN12P56749 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN12P56749 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN12P56749 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN12P56749 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CLDN12P56749 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.83■□□□□ 0.12
CLDN12P56749 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.83■□□□□ 0.12
CLDN12P56749 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CLDN12P56749 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN12P56749 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN12P56749 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN12P56749 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN12P56749 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.83■□□□□ 0.12
CLDN12P56749 KRT16P5-201ENST00000455284 522 ntBASIC15.83■□□□□ 0.12
CLDN12P56749 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN12P56749 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN12P56749 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.83■□□□□ 0.12
CLDN12P56749 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.83■□□□□ 0.12
CLDN12P56749 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN12P56749 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN12P56749 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CLDN12P56749 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN12P56749 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CLDN12P56749 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CLDN12P56749 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN12P56749 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CLDN12P56749 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN12P56749 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN12P56749 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN12P56749 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CLDN12P56749 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.83■□□□□ 0.12
CLDN12P56749 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.83■□□□□ 0.12
CLDN12P56749 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CLDN12P56749 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms