Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA2D1P54289 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CACNA2D1P54289 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA2D1P54289 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA2D1P54289 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA2D1P54289 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA2D1P54289 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA2D1P54289 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA2D1P54289 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA2D1P54289 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA2D1P54289 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA2D1P54289 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA2D1P54289 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CACNA2D1P54289 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA2D1P54289 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CACNA2D1P54289 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNA2D1P54289 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA2D1P54289 CHCHD2P8-201ENST00000429873 447 ntBASIC19.25■□□□□ 0.67
CACNA2D1P54289 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.25■□□□□ 0.67
CACNA2D1P54289 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.25■□□□□ 0.67
CACNA2D1P54289 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNA2D1P54289 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.25■□□□□ 0.67
CACNA2D1P54289 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.25■□□□□ 0.67
CACNA2D1P54289 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.25■□□□□ 0.67
CACNA2D1P54289 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CACNA2D1P54289 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA2D1P54289 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CACNA2D1P54289 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
CACNA2D1P54289 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CACNA2D1P54289 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA2D1P54289 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CACNA2D1P54289 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA2D1P54289 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA2D1P54289 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.25■□□□□ 0.67
CACNA2D1P54289 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNA2D1P54289 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.25■□□□□ 0.67
CACNA2D1P54289 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CACNA2D1P54289 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CACNA2D1P54289 AC020916.1-201ENST00000587762 1774 ntBASIC19.24■□□□□ 0.67
CACNA2D1P54289 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA2D1P54289 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA2D1P54289 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA2D1P54289 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.24■□□□□ 0.67
CACNA2D1P54289 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.24■□□□□ 0.67
CACNA2D1P54289 AL353692.3-201ENST00000407031 1396 ntBASIC19.24■□□□□ 0.67
CACNA2D1P54289 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA2D1P54289 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CACNA2D1P54289 AC073592.3-201ENST00000625118 1834 ntBASIC19.24■□□□□ 0.67
CACNA2D1P54289 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA2D1P54289 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.24■□□□□ 0.67
CACNA2D1P54289 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.24■□□□□ 0.67
CACNA2D1P54289 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.24■□□□□ 0.67
CACNA2D1P54289 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.24■□□□□ 0.67
CACNA2D1P54289 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA2D1P54289 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA2D1P54289 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CACNA2D1P54289 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA2D1P54289 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA2D1P54289 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.24■□□□□ 0.67
CACNA2D1P54289 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA2D1P54289 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.23■□□□□ 0.67
CACNA2D1P54289 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.23■□□□□ 0.67
CACNA2D1P54289 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA2D1P54289 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA2D1P54289 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA2D1P54289 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
CACNA2D1P54289 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA2D1P54289 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CACNA2D1P54289 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA2D1P54289 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
CACNA2D1P54289 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA2D1P54289 TPSP2-201ENST00000561760 610 ntBASIC19.23■□□□□ 0.67
CACNA2D1P54289 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.23■□□□□ 0.67
CACNA2D1P54289 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
CACNA2D1P54289 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA2D1P54289 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CACNA2D1P54289 AC012313.10-201ENST00000623509 926 ntBASIC19.23■□□□□ 0.67
CACNA2D1P54289 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.23■□□□□ 0.67
CACNA2D1P54289 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.23■□□□□ 0.67
CACNA2D1P54289 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA2D1P54289 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.23■□□□□ 0.67
CACNA2D1P54289 ESPNP-201ENST00000270691 2015 ntBASIC19.23■□□□□ 0.67
CACNA2D1P54289 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.23■□□□□ 0.67
CACNA2D1P54289 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA2D1P54289 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA2D1P54289 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA2D1P54289 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CACNA2D1P54289 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA2D1P54289 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA2D1P54289 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA2D1P54289 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.22■□□□□ 0.67
CACNA2D1P54289 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.22■□□□□ 0.67
CACNA2D1P54289 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.22■□□□□ 0.67
CACNA2D1P54289 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.22■□□□□ 0.67
CACNA2D1P54289 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA2D1P54289 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CACNA2D1P54289 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA2D1P54289 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms