Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PMS1P54277 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PMS1P54277 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PMS1P54277 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PMS1P54277 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PMS1P54277 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
PMS1P54277 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PMS1P54277 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PMS1P54277 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
PMS1P54277 LTB4R2-202ENST00000528054 3092 ntBASIC20.01■□□□□ 0.79
PMS1P54277 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS1P54277 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.01■□□□□ 0.79
PMS1P54277 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS1P54277 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PMS1P54277 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS1P54277 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PMS1P54277 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.01■□□□□ 0.79
PMS1P54277 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS1P54277 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS1P54277 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS1P54277 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS1P54277 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS1P54277 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.01■□□□□ 0.79
PMS1P54277 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS1P54277 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.01■□□□□ 0.79
PMS1P54277 AC009065.1-201ENST00000564055 1225 ntBASIC20.01■□□□□ 0.79
PMS1P54277 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.01■□□□□ 0.79
PMS1P54277 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PMS1P54277 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS1P54277 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS1P54277 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS1P54277 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS1P54277 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PMS1P54277 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.01■□□□□ 0.79
PMS1P54277 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.01■□□□□ 0.79
PMS1P54277 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS1P54277 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PMS1P54277 AC100803.2-201ENST00000562459 1963 ntBASIC20.01■□□□□ 0.79
PMS1P54277 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.01■□□□□ 0.79
PMS1P54277 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PMS1P54277 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PMS1P54277 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20■□□□□ 0.79
PMS1P54277 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
PMS1P54277 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PMS1P54277 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PMS1P54277 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PMS1P54277 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PMS1P54277 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PMS1P54277 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PMS1P54277 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
PMS1P54277 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
PMS1P54277 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20■□□□□ 0.79
PMS1P54277 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
PMS1P54277 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20■□□□□ 0.79
PMS1P54277 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
PMS1P54277 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20■□□□□ 0.79
PMS1P54277 AC145285.6-201ENST00000604632 637 ntBASIC20■□□□□ 0.79
PMS1P54277 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PMS1P54277 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20■□□□□ 0.79
PMS1P54277 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20■□□□□ 0.79
PMS1P54277 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20■□□□□ 0.79
PMS1P54277 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PMS1P54277 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20■□□□□ 0.79
PMS1P54277 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PMS1P54277 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20■□□□□ 0.79
PMS1P54277 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20■□□□□ 0.79
PMS1P54277 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20■□□□□ 0.79
PMS1P54277 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20■□□□□ 0.79
PMS1P54277 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PMS1P54277 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20■□□□□ 0.79
PMS1P54277 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20■□□□□ 0.79
PMS1P54277 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20■□□□□ 0.79
PMS1P54277 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS1P54277 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PMS1P54277 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.99■□□□□ 0.79
PMS1P54277 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.99■□□□□ 0.79
PMS1P54277 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.99■□□□□ 0.79
PMS1P54277 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS1P54277 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
PMS1P54277 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS1P54277 KRT18P55-202ENST00000578578 1546 ntBASIC19.99■□□□□ 0.79
PMS1P54277 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PMS1P54277 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS1P54277 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
PMS1P54277 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
PMS1P54277 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.99■□□□□ 0.79
PMS1P54277 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS1P54277 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.99■□□□□ 0.79
PMS1P54277 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PMS1P54277 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.99■□□□□ 0.79
PMS1P54277 GCSHP2-201ENST00000560971 527 ntBASIC19.99■□□□□ 0.79
PMS1P54277 AC141257.4-201ENST00000634557 245 ntBASIC19.99■□□□□ 0.79
PMS1P54277 AC136944.6-201ENST00000634818 245 ntBASIC19.99■□□□□ 0.79
PMS1P54277 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.99■□□□□ 0.79
PMS1P54277 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PMS1P54277 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS1P54277 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS1P54277 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.99■□□□□ 0.79
PMS1P54277 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS1P54277 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms