Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
ACLYP53396 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.99■□□□□ 0.79
ACLYP53396 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
ACLYP53396 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.99■□□□□ 0.79
ACLYP53396 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.99■□□□□ 0.79
ACLYP53396 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.99■□□□□ 0.79
ACLYP53396 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ACLYP53396 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ACLYP53396 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACLYP53396 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACLYP53396 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ACLYP53396 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
ACLYP53396 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.98■□□□□ 0.79
ACLYP53396 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ACLYP53396 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACLYP53396 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACLYP53396 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
ACLYP53396 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACLYP53396 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.98■□□□□ 0.79
ACLYP53396 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACLYP53396 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACLYP53396 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.98■□□□□ 0.79
ACLYP53396 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
ACLYP53396 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACLYP53396 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACLYP53396 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.98■□□□□ 0.79
ACLYP53396 AC002347.1-201ENST00000569543 541 ntBASIC19.98■□□□□ 0.79
ACLYP53396 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACLYP53396 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.98■□□□□ 0.79
ACLYP53396 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.98■□□□□ 0.79
ACLYP53396 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ACLYP53396 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ACLYP53396 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
ACLYP53396 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ACLYP53396 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ACLYP53396 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.97■□□□□ 0.79
ACLYP53396 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ACLYP53396 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACLYP53396 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ACLYP53396 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
ACLYP53396 AL499627.1-201ENST00000569373 2188 ntBASIC19.97■□□□□ 0.79
ACLYP53396 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACLYP53396 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACLYP53396 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACLYP53396 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACLYP53396 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACLYP53396 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.97■□□□□ 0.79
ACLYP53396 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ACLYP53396 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.97■□□□□ 0.79
ACLYP53396 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACLYP53396 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.97■□□□□ 0.79
ACLYP53396 AC023274.1-201ENST00000418278 595 ntBASIC19.97■□□□□ 0.79
ACLYP53396 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.97■□□□□ 0.79
ACLYP53396 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.97■□□□□ 0.79
ACLYP53396 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.97■□□□□ 0.79
ACLYP53396 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.97■□□□□ 0.79
ACLYP53396 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.97■□□□□ 0.79
ACLYP53396 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.97■□□□□ 0.79
ACLYP53396 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.97■□□□□ 0.79
ACLYP53396 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.97■□□□□ 0.79
ACLYP53396 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.97■□□□□ 0.79
ACLYP53396 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.97■□□□□ 0.79
ACLYP53396 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.97■□□□□ 0.79
ACLYP53396 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACLYP53396 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.97■□□□□ 0.79
ACLYP53396 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACLYP53396 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACLYP53396 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ACLYP53396 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ACLYP53396 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ACLYP53396 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ACLYP53396 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ACLYP53396 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.96■□□□□ 0.79
ACLYP53396 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ACLYP53396 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ACLYP53396 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.96■□□□□ 0.79
ACLYP53396 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ACLYP53396 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ACLYP53396 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.96■□□□□ 0.79
ACLYP53396 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.96■□□□□ 0.79
ACLYP53396 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.96■□□□□ 0.79
ACLYP53396 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.96■□□□□ 0.79
ACLYP53396 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.96■□□□□ 0.79
ACLYP53396 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.96■□□□□ 0.79
ACLYP53396 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ACLYP53396 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.96■□□□□ 0.79
ACLYP53396 BX005266.1-201ENST00000473402 457 ntBASIC19.96■□□□□ 0.79
ACLYP53396 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.96■□□□□ 0.79
ACLYP53396 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.96■□□□□ 0.79
ACLYP53396 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.96■□□□□ 0.79
ACLYP53396 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.96■□□□□ 0.79
ACLYP53396 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.96■□□□□ 0.79
ACLYP53396 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.96■□□□□ 0.79
ACLYP53396 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.96■□□□□ 0.79
ACLYP53396 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ACLYP53396 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ACLYP53396 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.96■□□□□ 0.79
ACLYP53396 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.96■□□□□ 0.79
ACLYP53396 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ACLYP53396 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms