Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AL691432.3-201ENST00000621860 400 ntBASIC17.07■□□□□ 0.32
SMSP52788 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.07■□□□□ 0.32
SMSP52788 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SMSP52788 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMSP52788 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMSP52788 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMSP52788 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMSP52788 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMSP52788 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMSP52788 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.07■□□□□ 0.32
SMSP52788 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMSP52788 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMSP52788 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMSP52788 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.06■□□□□ 0.32
SMSP52788 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SMSP52788 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMSP52788 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMSP52788 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.06■□□□□ 0.32
SMSP52788 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.06■□□□□ 0.32
SMSP52788 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.06■□□□□ 0.32
SMSP52788 VENTXP5-201ENST00000523979 775 ntBASIC17.06■□□□□ 0.32
SMSP52788 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.06■□□□□ 0.32
SMSP52788 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.06■□□□□ 0.32
SMSP52788 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.06■□□□□ 0.32
SMSP52788 CKBP1-201ENST00000565489 1086 ntBASIC17.06■□□□□ 0.32
SMSP52788 AL441883.1-201ENST00000566170 1045 ntBASIC17.06■□□□□ 0.32
SMSP52788 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.06■□□□□ 0.32
SMSP52788 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.06■□□□□ 0.32
SMSP52788 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMSP52788 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SMSP52788 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.06■□□□□ 0.32
SMSP52788 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.06■□□□□ 0.32
SMSP52788 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.06■□□□□ 0.32
SMSP52788 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SMSP52788 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SMSP52788 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMSP52788 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMSP52788 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.06■□□□□ 0.32
SMSP52788 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SMSP52788 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMSP52788 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.05■□□□□ 0.32
SMSP52788 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMSP52788 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMSP52788 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.05■□□□□ 0.32
SMSP52788 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SMSP52788 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.05■□□□□ 0.32
SMSP52788 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMSP52788 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.05■□□□□ 0.32
SMSP52788 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMSP52788 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SMSP52788 AC005332.1-201ENST00000577698 1310 ntBASIC17.05■□□□□ 0.32
SMSP52788 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMSP52788 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMSP52788 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.05■□□□□ 0.32
SMSP52788 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.05■□□□□ 0.32
SMSP52788 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMSP52788 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.05■□□□□ 0.32
SMSP52788 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
SMSP52788 PRSS44-201ENST00000515154 1146 ntBASIC17.05■□□□□ 0.32
SMSP52788 AP003041.3-201ENST00000527151 707 ntBASIC17.05■□□□□ 0.32
SMSP52788 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.05■□□□□ 0.32
SMSP52788 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.05■□□□□ 0.32
SMSP52788 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMSP52788 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SMSP52788 AC116407.4-201ENST00000623319 1061 ntBASIC17.05■□□□□ 0.32
SMSP52788 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
SMSP52788 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMSP52788 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMSP52788 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMSP52788 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SMSP52788 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMSP52788 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMSP52788 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.05■□□□□ 0.32
SMSP52788 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMSP52788 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMSP52788 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMSP52788 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMSP52788 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMSP52788 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SMSP52788 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SMSP52788 AP000997.3-201ENST00000623333 2250 ntBASIC17.04■□□□□ 0.32
SMSP52788 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMSP52788 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMSP52788 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMSP52788 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMSP52788 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMSP52788 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMSP52788 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMSP52788 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMSP52788 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMSP52788 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMSP52788 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.04■□□□□ 0.32
SMSP52788 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.04■□□□□ 0.32
SMSP52788 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMSP52788 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.04■□□□□ 0.32
SMSP52788 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMSP52788 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMSP52788 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMSP52788 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.04■□□□□ 0.32
SMSP52788 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms