Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 C20orf181-201ENST00000623918 480 ntBASIC32.38■■■□□ 2.77
SMARCA4P51532 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SMARCA4P51532 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SMARCA4P51532 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
SMARCA4P51532 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC32.38■■■□□ 2.77
SMARCA4P51532 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SMARCA4P51532 ELL2P1-201ENST00000413990 1906 ntBASIC32.38■■■□□ 2.77
SMARCA4P51532 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC32.37■■■□□ 2.77
SMARCA4P51532 AC004817.3-201ENST00000602957 2129 ntBASIC32.37■■■□□ 2.77
SMARCA4P51532 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SMARCA4P51532 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SMARCA4P51532 IGLL3P-201ENST00000412472 434 ntBASIC32.37■■■□□ 2.77
SMARCA4P51532 CNN2P11-201ENST00000429351 262 ntBASIC32.37■■■□□ 2.77
SMARCA4P51532 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC32.37■■■□□ 2.77
SMARCA4P51532 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC32.37■■■□□ 2.77
SMARCA4P51532 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC32.37■■■□□ 2.77
SMARCA4P51532 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC32.37■■■□□ 2.77
SMARCA4P51532 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC32.37■■■□□ 2.77
SMARCA4P51532 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC32.37■■■□□ 2.77
SMARCA4P51532 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SMARCA4P51532 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC32.37■■■□□ 2.77
SMARCA4P51532 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
SMARCA4P51532 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
SMARCA4P51532 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
SMARCA4P51532 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC32.36■■■□□ 2.77
SMARCA4P51532 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
SMARCA4P51532 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
SMARCA4P51532 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
SMARCA4P51532 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC32.36■■■□□ 2.77
SMARCA4P51532 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC32.36■■■□□ 2.77
SMARCA4P51532 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC32.36■■■□□ 2.77
SMARCA4P51532 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC32.36■■■□□ 2.77
SMARCA4P51532 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC32.36■■■□□ 2.77
SMARCA4P51532 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC32.36■■■□□ 2.77
SMARCA4P51532 RIN3-211ENST00000557762 517 ntTSL 3 BASIC32.36■■■□□ 2.77
SMARCA4P51532 RPL28-205ENST00000558131 444 ntTSL 5 BASIC32.36■■■□□ 2.77
SMARCA4P51532 SPCS2P1-201ENST00000561636 679 ntBASIC32.36■■■□□ 2.77
SMARCA4P51532 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
SMARCA4P51532 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC32.36■■■□□ 2.77
SMARCA4P51532 AC006504.4-201ENST00000592118 1568 ntBASIC32.36■■■□□ 2.77
SMARCA4P51532 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
SMARCA4P51532 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
SMARCA4P51532 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC32.35■■■□□ 2.77
SMARCA4P51532 AC004706.3-202ENST00000621574 984 ntBASIC32.35■■■□□ 2.77
SMARCA4P51532 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC32.35■■■□□ 2.77
SMARCA4P51532 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC32.35■■■□□ 2.77
SMARCA4P51532 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC32.35■■■□□ 2.77
SMARCA4P51532 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
SMARCA4P51532 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC32.34■■■□□ 2.77
SMARCA4P51532 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
SMARCA4P51532 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
SMARCA4P51532 AL035633.1-201ENST00000406139 838 ntBASIC32.34■■■□□ 2.77
SMARCA4P51532 ARTN-206ENST00000472435 402 ntTSL 3 BASIC32.34■■■□□ 2.77
SMARCA4P51532 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC32.34■■■□□ 2.77
SMARCA4P51532 AL589182.2-201ENST00000619332 1049 ntBASIC32.34■■■□□ 2.77
SMARCA4P51532 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC32.34■■■□□ 2.77
SMARCA4P51532 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
SMARCA4P51532 AC093484.2-201ENST00000580996 2166 ntBASIC32.33■■■□□ 2.77
SMARCA4P51532 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
SMARCA4P51532 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
SMARCA4P51532 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
SMARCA4P51532 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
SMARCA4P51532 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
SMARCA4P51532 BID-204ENST00000399767 2129 ntTSL 2 BASIC32.33■■■□□ 2.77
SMARCA4P51532 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC32.33■■■□□ 2.77
SMARCA4P51532 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC32.33■■■□□ 2.77
SMARCA4P51532 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC32.33■■■□□ 2.77
SMARCA4P51532 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
SMARCA4P51532 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC32.33■■■□□ 2.77
SMARCA4P51532 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC32.33■■■□□ 2.77
SMARCA4P51532 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC32.33■■■□□ 2.77
SMARCA4P51532 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
SMARCA4P51532 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC32.33■■■□□ 2.77
SMARCA4P51532 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC32.33■■■□□ 2.77
SMARCA4P51532 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC32.33■■■□□ 2.77
SMARCA4P51532 GPR89P-201ENST00000407924 1495 ntBASIC32.32■■■□□ 2.77
SMARCA4P51532 MED29-202ENST00000594368 1471 ntTSL 2 BASIC32.32■■■□□ 2.77
SMARCA4P51532 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC32.32■■■□□ 2.77
SMARCA4P51532 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC32.32■■■□□ 2.77
SMARCA4P51532 USP39-202ENST00000409025 1946 ntTSL 5 BASIC32.32■■■□□ 2.76
SMARCA4P51532 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
SMARCA4P51532 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SMARCA4P51532 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SMARCA4P51532 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
SMARCA4P51532 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC32.32■■■□□ 2.76
SMARCA4P51532 MIR4751-201ENST00000578027 74 ntBASIC32.32■■■□□ 2.76
SMARCA4P51532 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC32.32■■■□□ 2.76
SMARCA4P51532 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC32.32■■■□□ 2.76
SMARCA4P51532 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
SMARCA4P51532 NCF1C-201ENST00000438382 1427 ntBASIC32.31■■■□□ 2.76
SMARCA4P51532 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SMARCA4P51532 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
SMARCA4P51532 AL353593.2-201ENST00000602529 1483 ntBASIC32.31■■■□□ 2.76
SMARCA4P51532 AC010507.1-201ENST00000633895 436 ntBASIC32.31■■■□□ 2.76
SMARCA4P51532 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC32.31■■■□□ 2.76
SMARCA4P51532 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC32.31■■■□□ 2.76
SMARCA4P51532 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC32.31■■■□□ 2.76
SMARCA4P51532 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SMARCA4P51532 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SMARCA4P51532 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms