Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC1A2P43004 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A2P43004 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SLC1A2P43004 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A2P43004 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.14■□□□□ 0.49
SLC1A2P43004 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC1A2P43004 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC1A2P43004 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC1A2P43004 MIR3917-201ENST00000580971 93 ntBASIC18.14■□□□□ 0.49
SLC1A2P43004 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.14■□□□□ 0.49
SLC1A2P43004 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A2P43004 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC1A2P43004 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.14■□□□□ 0.49
SLC1A2P43004 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A2P43004 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A2P43004 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A2P43004 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A2P43004 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A2P43004 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A2P43004 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
SLC1A2P43004 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A2P43004 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A2P43004 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A2P43004 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SLC1A2P43004 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A2P43004 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A2P43004 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A2P43004 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A2P43004 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A2P43004 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC1A2P43004 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
SLC1A2P43004 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.13■□□□□ 0.49
SLC1A2P43004 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
SLC1A2P43004 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC1A2P43004 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC1A2P43004 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.13■□□□□ 0.49
SLC1A2P43004 AC145285.6-201ENST00000604632 637 ntBASIC18.13■□□□□ 0.49
SLC1A2P43004 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC1A2P43004 AC092865.7-201ENST00000641832 219 ntBASIC18.13■□□□□ 0.49
SLC1A2P43004 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A2P43004 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
SLC1A2P43004 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A2P43004 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A2P43004 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC1A2P43004 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
SLC1A2P43004 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.13■□□□□ 0.49
SLC1A2P43004 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A2P43004 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
SLC1A2P43004 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC1A2P43004 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A2P43004 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A2P43004 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC1A2P43004 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC1A2P43004 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A2P43004 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC1A2P43004 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC1A2P43004 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A2P43004 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A2P43004 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SLC1A2P43004 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC1A2P43004 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SLC1A2P43004 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A2P43004 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SLC1A2P43004 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A2P43004 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SLC1A2P43004 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A2P43004 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A2P43004 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A2P43004 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SLC1A2P43004 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SLC1A2P43004 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A2P43004 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.12■□□□□ 0.49
SLC1A2P43004 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SLC1A2P43004 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A2P43004 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A2P43004 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
SLC1A2P43004 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SLC1A2P43004 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SLC1A2P43004 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SLC1A2P43004 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A2P43004 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A2P43004 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC1A2P43004 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A2P43004 AC012317.2-201ENST00000623305 2251 ntBASIC18.11■□□□□ 0.49
SLC1A2P43004 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A2P43004 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SLC1A2P43004 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A2P43004 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A2P43004 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A2P43004 AP000523.1-201ENST00000398242 1049 ntBASIC18.11■□□□□ 0.49
SLC1A2P43004 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC1A2P43004 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLC1A2P43004 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.11■□□□□ 0.49
SLC1A2P43004 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SLC1A2P43004 AL157888.1-201ENST00000631930 593 ntBASIC18.11■□□□□ 0.49
SLC1A2P43004 AC141257.4-201ENST00000634557 245 ntBASIC18.11■□□□□ 0.49
SLC1A2P43004 AC136944.6-201ENST00000634818 245 ntBASIC18.11■□□□□ 0.49
SLC1A2P43004 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SLC1A2P43004 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A2P43004 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms