Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HTTP42858 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HTTP42858 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HTTP42858 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HTTP42858 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.36■□□□□ 0.85
HTTP42858 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.36■□□□□ 0.85
HTTP42858 MIR4745-201ENST00000577608 62 ntBASIC20.36■□□□□ 0.85
HTTP42858 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HTTP42858 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HTTP42858 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.36■□□□□ 0.85
HTTP42858 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HTTP42858 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HTTP42858 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.36■□□□□ 0.85
HTTP42858 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
HTTP42858 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HTTP42858 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.36■□□□□ 0.85
HTTP42858 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.36■□□□□ 0.85
HTTP42858 AL049812.1-201ENST00000432563 2267 ntBASIC20.36■□□□□ 0.85
HTTP42858 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
HTTP42858 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HTTP42858 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HTTP42858 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.36■□□□□ 0.85
HTTP42858 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTTP42858 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.35■□□□□ 0.85
HTTP42858 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.35■□□□□ 0.85
HTTP42858 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTTP42858 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTTP42858 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HTTP42858 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.35■□□□□ 0.85
HTTP42858 MIR661-201ENST00000384842 89 ntBASIC20.35■□□□□ 0.85
HTTP42858 IGLL3P-201ENST00000412472 434 ntBASIC20.35■□□□□ 0.85
HTTP42858 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.35■□□□□ 0.85
HTTP42858 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.35■□□□□ 0.85
HTTP42858 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.35■□□□□ 0.85
HTTP42858 AC005593.1-201ENST00000624894 515 ntBASIC20.35■□□□□ 0.85
HTTP42858 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.35■□□□□ 0.85
HTTP42858 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.35■□□□□ 0.85
HTTP42858 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HTTP42858 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HTTP42858 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.35■□□□□ 0.85
HTTP42858 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.35■□□□□ 0.85
HTTP42858 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.35■□□□□ 0.85
HTTP42858 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HTTP42858 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.35■□□□□ 0.85
HTTP42858 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.35■□□□□ 0.85
HTTP42858 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.35■□□□□ 0.85
HTTP42858 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.35■□□□□ 0.85
HTTP42858 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HTTP42858 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.34■□□□□ 0.85
HTTP42858 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTTP42858 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HTTP42858 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.34■□□□□ 0.85
HTTP42858 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.34■□□□□ 0.85
HTTP42858 AC068587.9-201ENST00000641814 219 ntBASIC20.34■□□□□ 0.85
HTTP42858 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HTTP42858 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTTP42858 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.34■□□□□ 0.85
HTTP42858 BX005266.1-201ENST00000473402 457 ntBASIC20.34■□□□□ 0.85
HTTP42858 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.34■□□□□ 0.85
HTTP42858 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HTTP42858 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.33■□□□□ 0.85
HTTP42858 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTTP42858 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HTTP42858 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.33■□□□□ 0.85
HTTP42858 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.33■□□□□ 0.85
HTTP42858 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
HTTP42858 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.33■□□□□ 0.85
HTTP42858 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.33■□□□□ 0.85
HTTP42858 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HTTP42858 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.33■□□□□ 0.85
HTTP42858 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTTP42858 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HTTP42858 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
HTTP42858 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.33■□□□□ 0.85
HTTP42858 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.33■□□□□ 0.85
HTTP42858 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.33■□□□□ 0.84
HTTP42858 AC007967.3-201ENST00000434308 558 ntBASIC20.33■□□□□ 0.84
HTTP42858 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.33■□□□□ 0.84
HTTP42858 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HTTP42858 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.33■□□□□ 0.84
HTTP42858 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTTP42858 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTTP42858 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTTP42858 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTTP42858 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.32■□□□□ 0.84
HTTP42858 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTTP42858 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTTP42858 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTTP42858 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.32■□□□□ 0.84
HTTP42858 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTTP42858 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTTP42858 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HTTP42858 AC015922.1-201ENST00000421102 1152 ntBASIC20.32■□□□□ 0.84
HTTP42858 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.32■□□□□ 0.84
HTTP42858 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HTTP42858 AF228730.6-201ENST00000641497 218 ntBASIC20.32■□□□□ 0.84
HTTP42858 AC084121.3-201ENST00000641716 218 ntBASIC20.32■□□□□ 0.84
HTTP42858 AC105233.6-201ENST00000642093 218 ntBASIC20.32■□□□□ 0.84
HTTP42858 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.32■□□□□ 0.84
HTTP42858 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms