Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT9P35527 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT9P35527 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.92■□□□□ 0.78
KRT9P35527 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT9P35527 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT9P35527 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT9P35527 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT9P35527 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
KRT9P35527 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
KRT9P35527 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT9P35527 AL390955.1-201ENST00000428694 934 ntBASIC19.92■□□□□ 0.78
KRT9P35527 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.92■□□□□ 0.78
KRT9P35527 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT9P35527 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT9P35527 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.92■□□□□ 0.78
KRT9P35527 AC066615.1-201ENST00000640911 628 ntBASIC19.92■□□□□ 0.78
KRT9P35527 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT9P35527 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT9P35527 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.92■□□□□ 0.78
KRT9P35527 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.92■□□□□ 0.78
KRT9P35527 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT9P35527 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT9P35527 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT9P35527 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT9P35527 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
KRT9P35527 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT9P35527 AC012317.2-201ENST00000623305 2251 ntBASIC19.91■□□□□ 0.78
KRT9P35527 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
KRT9P35527 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.91■□□□□ 0.78
KRT9P35527 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT9P35527 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
KRT9P35527 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT9P35527 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT9P35527 SLC25A1P2-201ENST00000430693 912 ntBASIC19.91■□□□□ 0.78
KRT9P35527 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.91■□□□□ 0.78
KRT9P35527 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRT9P35527 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT9P35527 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT9P35527 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT9P35527 AC012313.1-201ENST00000593393 3059 ntBASIC19.91■□□□□ 0.78
KRT9P35527 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT9P35527 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRT9P35527 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
KRT9P35527 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT9P35527 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
KRT9P35527 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT9P35527 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
KRT9P35527 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT9P35527 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT9P35527 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT9P35527 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
KRT9P35527 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT9P35527 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
KRT9P35527 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT9P35527 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.9■□□□□ 0.78
KRT9P35527 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
KRT9P35527 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.9■□□□□ 0.78
KRT9P35527 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT9P35527 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT9P35527 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT9P35527 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
KRT9P35527 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT9P35527 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.9■□□□□ 0.78
KRT9P35527 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT9P35527 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT9P35527 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
KRT9P35527 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT9P35527 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT9P35527 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT9P35527 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
KRT9P35527 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT9P35527 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT9P35527 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.89■□□□□ 0.78
KRT9P35527 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
KRT9P35527 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
KRT9P35527 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.89■□□□□ 0.78
KRT9P35527 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT9P35527 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT9P35527 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.89■□□□□ 0.77
KRT9P35527 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT9P35527 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT9P35527 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT9P35527 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.89■□□□□ 0.77
KRT9P35527 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
KRT9P35527 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.89■□□□□ 0.77
KRT9P35527 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.89■□□□□ 0.77
KRT9P35527 CCR12P-201ENST00000446203 998 ntBASIC19.89■□□□□ 0.77
KRT9P35527 TSPY17P-201ENST00000450329 467 ntBASIC19.89■□□□□ 0.77
KRT9P35527 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.89■□□□□ 0.77
KRT9P35527 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.89■□□□□ 0.77
KRT9P35527 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.89■□□□□ 0.77
KRT9P35527 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
KRT9P35527 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT9P35527 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
KRT9P35527 C2orf69P3-201ENST00000565542 1120 ntBASIC19.89■□□□□ 0.77
KRT9P35527 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT9P35527 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT9P35527 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.88■□□□□ 0.77
KRT9P35527 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT9P35527 SDHAP2-201ENST00000455183 2001 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms