Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.73■□□□□ 0.91
CLCN1P35523 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN1P35523 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN1P35523 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CLCN1P35523 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CLCN1P35523 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN1P35523 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN1P35523 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN1P35523 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN1P35523 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN1P35523 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN1P35523 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.72■□□□□ 0.91
CLCN1P35523 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.72■□□□□ 0.91
CLCN1P35523 PRKY-204ENST00000533551 1019 ntBASIC20.72■□□□□ 0.91
CLCN1P35523 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.72■□□□□ 0.91
CLCN1P35523 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN1P35523 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN1P35523 MIR4651-201ENST00000582622 73 ntBASIC20.72■□□□□ 0.91
CLCN1P35523 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.72■□□□□ 0.91
CLCN1P35523 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN1P35523 NBPF21P-201ENST00000425093 1451 ntBASIC20.72■□□□□ 0.91
CLCN1P35523 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN1P35523 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.72■□□□□ 0.91
CLCN1P35523 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN1P35523 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.72■□□□□ 0.91
CLCN1P35523 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN1P35523 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN1P35523 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CLCN1P35523 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN1P35523 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN1P35523 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN1P35523 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN1P35523 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN1P35523 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN1P35523 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.71■□□□□ 0.91
CLCN1P35523 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN1P35523 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLCN1P35523 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN1P35523 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CLCN1P35523 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN1P35523 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCN1P35523 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CLCN1P35523 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN1P35523 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN1P35523 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CLCN1P35523 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN1P35523 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN1P35523 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN1P35523 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN1P35523 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN1P35523 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.71■□□□□ 0.91
CLCN1P35523 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCN1P35523 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC20.71■□□□□ 0.91
CLCN1P35523 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN1P35523 FEM1AP3-201ENST00000403722 1741 ntBASIC20.7■□□□□ 0.9
CLCN1P35523 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLCN1P35523 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
CLCN1P35523 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN1P35523 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN1P35523 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN1P35523 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CLCN1P35523 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN1P35523 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.7■□□□□ 0.9
CLCN1P35523 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN1P35523 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.7■□□□□ 0.9
CLCN1P35523 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.7■□□□□ 0.9
CLCN1P35523 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN1P35523 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CLCN1P35523 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN1P35523 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN1P35523 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN1P35523 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CLCN1P35523 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC20.7■□□□□ 0.9
CLCN1P35523 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN1P35523 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN1P35523 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CLCN1P35523 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.69■□□□□ 0.9
CLCN1P35523 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN1P35523 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CLCN1P35523 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN1P35523 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN1P35523 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN1P35523 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN1P35523 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CLCN1P35523 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.69■□□□□ 0.9
CLCN1P35523 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN1P35523 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN1P35523 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN1P35523 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN1P35523 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CLCN1P35523 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN1P35523 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.69■□□□□ 0.9
CLCN1P35523 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.69■□□□□ 0.9
CLCN1P35523 CD99P1-205ENST00000527459 561 ntBASIC20.69■□□□□ 0.9
CLCN1P35523 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.69■□□□□ 0.9
CLCN1P35523 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.69■□□□□ 0.9
CLCN1P35523 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms