Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXA13P31271 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA13P31271 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA13P31271 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA13P31271 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
HOXA13P31271 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
HOXA13P31271 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXA13P31271 RN7SL510P-201ENST00000581311 263 ntBASIC20.66■□□□□ 0.9
HOXA13P31271 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA13P31271 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA13P31271 IFNL4P1-201ENST00000607083 540 ntBASIC20.66■□□□□ 0.9
HOXA13P31271 AC009154.2-201ENST00000621177 724 ntBASIC20.66■□□□□ 0.9
HOXA13P31271 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.66■□□□□ 0.9
HOXA13P31271 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA13P31271 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA13P31271 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXA13P31271 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA13P31271 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA13P31271 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA13P31271 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
HOXA13P31271 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA13P31271 AC104581.1-202ENST00000635932 2618 ntBASIC20.66■□□□□ 0.9
HOXA13P31271 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HOXA13P31271 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA13P31271 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA13P31271 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXA13P31271 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA13P31271 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA13P31271 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HOXA13P31271 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.65■□□□□ 0.9
HOXA13P31271 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXA13P31271 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA13P31271 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA13P31271 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA13P31271 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA13P31271 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA13P31271 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HOXA13P31271 AC246785.2-201ENST00000432512 513 ntBASIC20.65■□□□□ 0.9
HOXA13P31271 MINOS1P3-201ENST00000457048 203 ntBASIC20.65■□□□□ 0.9
HOXA13P31271 KRT18P31-201ENST00000506277 1292 ntBASIC20.65■□□□□ 0.9
HOXA13P31271 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.65■□□□□ 0.9
HOXA13P31271 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA13P31271 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA13P31271 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.65■□□□□ 0.9
HOXA13P31271 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HOXA13P31271 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA13P31271 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA13P31271 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA13P31271 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
HOXA13P31271 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.64■□□□□ 0.9
HOXA13P31271 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.64■□□□□ 0.9
HOXA13P31271 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXA13P31271 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA13P31271 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA13P31271 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA13P31271 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA13P31271 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.64■□□□□ 0.89
HOXA13P31271 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.64■□□□□ 0.89
HOXA13P31271 MTCL1P1-201ENST00000446207 792 ntBASIC20.64■□□□□ 0.89
HOXA13P31271 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA13P31271 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.64■□□□□ 0.89
HOXA13P31271 AC091304.2-201ENST00000564639 760 ntBASIC20.64■□□□□ 0.89
HOXA13P31271 AC005336.2-201ENST00000593183 939 ntBASIC20.64■□□□□ 0.89
HOXA13P31271 AL121772.3-201ENST00000610840 674 ntBASIC20.64■□□□□ 0.89
HOXA13P31271 AL691432.3-201ENST00000621860 400 ntBASIC20.64■□□□□ 0.89
HOXA13P31271 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.64■□□□□ 0.89
HOXA13P31271 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA13P31271 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
HOXA13P31271 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA13P31271 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
HOXA13P31271 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA13P31271 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA13P31271 AL138781.2-201ENST00000617896 1843 ntBASIC20.64■□□□□ 0.89
HOXA13P31271 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
HOXA13P31271 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXA13P31271 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
HOXA13P31271 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA13P31271 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HOXA13P31271 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA13P31271 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXA13P31271 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA13P31271 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXA13P31271 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA13P31271 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.63■□□□□ 0.89
HOXA13P31271 NUS1P2-201ENST00000417358 873 ntBASIC20.63■□□□□ 0.89
HOXA13P31271 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
HOXA13P31271 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.63■□□□□ 0.89
HOXA13P31271 AC111152.3-201ENST00000569699 673 ntBASIC20.63■□□□□ 0.89
HOXA13P31271 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.63■□□□□ 0.89
HOXA13P31271 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA13P31271 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA13P31271 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HOXA13P31271 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA13P31271 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXA13P31271 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA13P31271 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXA13P31271 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA13P31271 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA13P31271 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXA13P31271 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms