Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
EPHA3P29320 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.72■□□□□ 0.43
EPHA3P29320 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.72■□□□□ 0.43
EPHA3P29320 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
EPHA3P29320 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
EPHA3P29320 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 AC124067.4-201ENST00000519691 2379 ntBASIC17.72■□□□□ 0.43
EPHA3P29320 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.72■□□□□ 0.43
EPHA3P29320 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
EPHA3P29320 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.72■□□□□ 0.43
EPHA3P29320 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
EPHA3P29320 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.72■□□□□ 0.43
EPHA3P29320 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 AC073648.6-201ENST00000641589 218 ntBASIC17.72■□□□□ 0.43
EPHA3P29320 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
EPHA3P29320 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
EPHA3P29320 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
EPHA3P29320 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA3P29320 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
EPHA3P29320 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA3P29320 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA3P29320 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
EPHA3P29320 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA3P29320 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA3P29320 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA3P29320 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA3P29320 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA3P29320 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA3P29320 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.71■□□□□ 0.43
EPHA3P29320 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.71■□□□□ 0.43
EPHA3P29320 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA3P29320 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
EPHA3P29320 AF186192.3-201ENST00000583427 947 ntBASIC17.71■□□□□ 0.43
EPHA3P29320 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
EPHA3P29320 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA3P29320 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.71■□□□□ 0.43
EPHA3P29320 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA3P29320 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA3P29320 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA3P29320 AL163051.1-201ENST00000569214 1512 ntBASIC17.71■□□□□ 0.43
EPHA3P29320 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
EPHA3P29320 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA3P29320 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA3P29320 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.71■□□□□ 0.43
EPHA3P29320 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.71■□□□□ 0.43
EPHA3P29320 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.71■□□□□ 0.43
EPHA3P29320 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
EPHA3P29320 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
EPHA3P29320 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.42
EPHA3P29320 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.71■□□□□ 0.42
EPHA3P29320 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
EPHA3P29320 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.71■□□□□ 0.42
EPHA3P29320 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA3P29320 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA3P29320 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA3P29320 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA3P29320 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA3P29320 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA3P29320 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.7■□□□□ 0.42
EPHA3P29320 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA3P29320 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA3P29320 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA3P29320 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA3P29320 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA3P29320 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.7■□□□□ 0.42
EPHA3P29320 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA3P29320 MESTP1-201ENST00000404287 994 ntBASIC17.7■□□□□ 0.42
EPHA3P29320 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.7■□□□□ 0.42
EPHA3P29320 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA3P29320 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.7■□□□□ 0.42
EPHA3P29320 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.7■□□□□ 0.42
EPHA3P29320 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
EPHA3P29320 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.7■□□□□ 0.42
EPHA3P29320 AC073195.1-201ENST00000607241 877 ntBASIC17.7■□□□□ 0.42
EPHA3P29320 AP000692.2-201ENST00000608391 879 ntBASIC17.7■□□□□ 0.42
EPHA3P29320 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
EPHA3P29320 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA3P29320 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA3P29320 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
EPHA3P29320 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EPHA3P29320 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms