Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.88■□□□□ 0.45
VARSP26640 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
VARSP26640 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 MYLKP1-201ENST00000509077 1580 ntBASIC17.88■□□□□ 0.45
VARSP26640 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VARSP26640 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
VARSP26640 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.88■□□□□ 0.45
VARSP26640 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.88■□□□□ 0.45
VARSP26640 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 KRT18P41-201ENST00000518924 1277 ntBASIC17.88■□□□□ 0.45
VARSP26640 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
VARSP26640 AL512604.3-201ENST00000569583 964 ntBASIC17.88■□□□□ 0.45
VARSP26640 WWOX-216ENST00000569818 525 ntBASIC17.88■□□□□ 0.45
VARSP26640 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.88■□□□□ 0.45
VARSP26640 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.88■□□□□ 0.45
VARSP26640 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
VARSP26640 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VARSP26640 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
VARSP26640 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.88■□□□□ 0.45
VARSP26640 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VARSP26640 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VARSP26640 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VARSP26640 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARSP26640 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.87■□□□□ 0.45
VARSP26640 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARSP26640 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARSP26640 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
VARSP26640 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.87■□□□□ 0.45
VARSP26640 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARSP26640 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
VARSP26640 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.87■□□□□ 0.45
VARSP26640 AC063952.2-201ENST00000498792 1227 ntBASIC17.87■□□□□ 0.45
VARSP26640 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VARSP26640 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VARSP26640 AC022616.7-201ENST00000525383 220 ntBASIC17.87■□□□□ 0.45
VARSP26640 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.87■□□□□ 0.45
VARSP26640 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.87■□□□□ 0.45
VARSP26640 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.87■□□□□ 0.45
VARSP26640 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
VARSP26640 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.87■□□□□ 0.45
VARSP26640 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARSP26640 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.87■□□□□ 0.45
VARSP26640 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VARSP26640 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARSP26640 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VARSP26640 KRT8P50-201ENST00000562022 1438 ntBASIC17.87■□□□□ 0.45
VARSP26640 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARSP26640 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VARSP26640 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARSP26640 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VARSP26640 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.87■□□□□ 0.45
VARSP26640 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.86■□□□□ 0.45
VARSP26640 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARSP26640 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.86■□□□□ 0.45
VARSP26640 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
VARSP26640 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.86■□□□□ 0.45
VARSP26640 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARSP26640 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VARSP26640 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARSP26640 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
VARSP26640 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
VARSP26640 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
VARSP26640 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARSP26640 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.86■□□□□ 0.45
VARSP26640 UPK3BP1-201ENST00000428678 509 ntBASIC17.86■□□□□ 0.45
VARSP26640 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.86■□□□□ 0.45
VARSP26640 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.86■□□□□ 0.45
VARSP26640 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.86■□□□□ 0.45
VARSP26640 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARSP26640 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.86■□□□□ 0.45
VARSP26640 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.86■□□□□ 0.45
VARSP26640 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.86■□□□□ 0.45
VARSP26640 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.86■□□□□ 0.45
VARSP26640 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.86■□□□□ 0.45
VARSP26640 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.86■□□□□ 0.45
VARSP26640 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.86■□□□□ 0.45
VARSP26640 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.86■□□□□ 0.45
VARSP26640 AC006011.2-201ENST00000621313 1158 ntBASIC17.86■□□□□ 0.45
VARSP26640 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.86■□□□□ 0.45
VARSP26640 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARSP26640 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
VARSP26640 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARSP26640 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VARSP26640 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms