Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMPD1P17405 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMPD1P17405 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMPD1P17405 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMPD1P17405 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.18■□□□□ 0.82
SMPD1P17405 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.17■□□□□ 0.82
SMPD1P17405 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMPD1P17405 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMPD1P17405 AC132938.6-201ENST00000623828 1655 ntBASIC20.17■□□□□ 0.82
SMPD1P17405 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMPD1P17405 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SMPD1P17405 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.17■□□□□ 0.82
SMPD1P17405 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMPD1P17405 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.17■□□□□ 0.82
SMPD1P17405 AC145285.3-201ENST00000564603 959 ntBASIC20.17■□□□□ 0.82
SMPD1P17405 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.17■□□□□ 0.82
SMPD1P17405 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMPD1P17405 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.17■□□□□ 0.82
SMPD1P17405 AC104109.2-201ENST00000602919 1418 ntBASIC20.17■□□□□ 0.82
SMPD1P17405 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.17■□□□□ 0.82
SMPD1P17405 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMPD1P17405 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.17■□□□□ 0.82
SMPD1P17405 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMPD1P17405 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMPD1P17405 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
SMPD1P17405 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.16■□□□□ 0.82
SMPD1P17405 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMPD1P17405 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.16■□□□□ 0.82
SMPD1P17405 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.16■□□□□ 0.82
SMPD1P17405 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMPD1P17405 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.16■□□□□ 0.82
SMPD1P17405 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.16■□□□□ 0.82
SMPD1P17405 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.16■□□□□ 0.82
SMPD1P17405 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.16■□□□□ 0.82
SMPD1P17405 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.16■□□□□ 0.82
SMPD1P17405 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SMPD1P17405 AC092910.1-201ENST00000482027 1129 ntBASIC20.16■□□□□ 0.82
SMPD1P17405 OR7E14P-202ENST00000530490 1290 ntBASIC20.16■□□□□ 0.82
SMPD1P17405 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.16■□□□□ 0.82
SMPD1P17405 NKAPP1-205ENST00000585790 367 ntBASIC20.16■□□□□ 0.82
SMPD1P17405 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMPD1P17405 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.16■□□□□ 0.82
SMPD1P17405 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.16■□□□□ 0.82
SMPD1P17405 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMPD1P17405 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMPD1P17405 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMPD1P17405 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMPD1P17405 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMPD1P17405 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMPD1P17405 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMPD1P17405 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.16■□□□□ 0.82
SMPD1P17405 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
SMPD1P17405 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMPD1P17405 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMPD1P17405 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMPD1P17405 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMPD1P17405 AC098831.1-202ENST00000438821 336 ntBASIC20.15■□□□□ 0.82
SMPD1P17405 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.15■□□□□ 0.82
SMPD1P17405 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.15■□□□□ 0.82
SMPD1P17405 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMPD1P17405 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.15■□□□□ 0.82
SMPD1P17405 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.15■□□□□ 0.82
SMPD1P17405 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMPD1P17405 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMPD1P17405 AP000867.4-201ENST00000641616 219 ntBASIC20.15■□□□□ 0.82
SMPD1P17405 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMPD1P17405 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMPD1P17405 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMPD1P17405 GMCL1P1-201ENST00000463439 1581 ntBASIC20.15■□□□□ 0.82
SMPD1P17405 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SMPD1P17405 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.15■□□□□ 0.82
SMPD1P17405 HLA-J-201ENST00000462773 1622 ntBASIC20.15■□□□□ 0.82
SMPD1P17405 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.15■□□□□ 0.82
SMPD1P17405 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMPD1P17405 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMPD1P17405 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
SMPD1P17405 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMPD1P17405 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMPD1P17405 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.14■□□□□ 0.82
SMPD1P17405 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMPD1P17405 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMPD1P17405 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SMPD1P17405 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SMPD1P17405 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMPD1P17405 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMPD1P17405 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.14■□□□□ 0.81
SMPD1P17405 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SMPD1P17405 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMPD1P17405 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.14■□□□□ 0.81
SMPD1P17405 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.14■□□□□ 0.81
SMPD1P17405 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.14■□□□□ 0.81
SMPD1P17405 BX842568.4-201ENST00000421222 227 ntBASIC20.14■□□□□ 0.81
SMPD1P17405 PGAM5P1-201ENST00000518923 814 ntBASIC20.14■□□□□ 0.81
SMPD1P17405 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
SMPD1P17405 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.14■□□□□ 0.81
SMPD1P17405 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.14■□□□□ 0.81
SMPD1P17405 AL139288.1-201ENST00000623748 933 ntBASIC20.14■□□□□ 0.81
SMPD1P17405 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SMPD1P17405 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SMPD1P17405 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms