Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CCL4P13236 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.13■□□□□ 0.33
CCL4P13236 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL4P13236 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.13■□□□□ 0.33
CCL4P13236 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.13■□□□□ 0.33
CCL4P13236 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CCL4P13236 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCL4P13236 KRT18P13-201ENST00000400056 1290 ntBASIC17.13■□□□□ 0.33
CCL4P13236 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.13■□□□□ 0.33
CCL4P13236 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.13■□□□□ 0.33
CCL4P13236 SART3-203ENST00000546611 1184 ntBASIC17.13■□□□□ 0.33
CCL4P13236 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.13■□□□□ 0.33
CCL4P13236 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.13■□□□□ 0.33
CCL4P13236 AC021087.4-201ENST00000563761 564 ntBASIC17.13■□□□□ 0.33
CCL4P13236 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.13■□□□□ 0.33
CCL4P13236 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL4P13236 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.13■□□□□ 0.33
CCL4P13236 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.13■□□□□ 0.33
CCL4P13236 AC139530.3-201ENST00000620344 690 ntBASIC17.13■□□□□ 0.33
CCL4P13236 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.13■□□□□ 0.33
CCL4P13236 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCL4P13236 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL4P13236 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL4P13236 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.13■□□□□ 0.33
CCL4P13236 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCL4P13236 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL4P13236 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.13■□□□□ 0.33
CCL4P13236 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.12■□□□□ 0.33
CCL4P13236 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL4P13236 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL4P13236 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL4P13236 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.12■□□□□ 0.33
CCL4P13236 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCL4P13236 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCL4P13236 ABCD1P5-201ENST00000445663 754 ntBASIC17.12■□□□□ 0.33
CCL4P13236 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL4P13236 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.12■□□□□ 0.33
CCL4P13236 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.12■□□□□ 0.33
CCL4P13236 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCL4P13236 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL4P13236 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL4P13236 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL4P13236 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCL4P13236 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CCL4P13236 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.12■□□□□ 0.33
CCL4P13236 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL4P13236 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCL4P13236 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CCL4P13236 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CCL4P13236 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL4P13236 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.12■□□□□ 0.33
CCL4P13236 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCL4P13236 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.12■□□□□ 0.33
CCL4P13236 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.11■□□□□ 0.33
CCL4P13236 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
CCL4P13236 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL4P13236 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL4P13236 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL4P13236 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL4P13236 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.11■□□□□ 0.33
CCL4P13236 AC112698.1-201ENST00000510299 916 ntBASIC17.11■□□□□ 0.33
CCL4P13236 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.11■□□□□ 0.33
CCL4P13236 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL4P13236 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.11■□□□□ 0.33
CCL4P13236 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.11■□□□□ 0.33
CCL4P13236 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL4P13236 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL4P13236 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL4P13236 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL4P13236 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL4P13236 RPS2P28-201ENST00000314255 741 ntBASIC17.1■□□□□ 0.33
CCL4P13236 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL4P13236 RPS2P1-201ENST00000434010 821 ntBASIC17.1■□□□□ 0.33
CCL4P13236 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL4P13236 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL4P13236 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL4P13236 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.1■□□□□ 0.33
CCL4P13236 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL4P13236 TERC-201ENST00000602385 541 ntBASIC17.1■□□□□ 0.33
CCL4P13236 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL4P13236 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL4P13236 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL4P13236 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
CCL4P13236 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL4P13236 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL4P13236 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL4P13236 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL4P13236 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL4P13236 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL4P13236 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.1■□□□□ 0.33
CCL4P13236 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL4P13236 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCL4P13236 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL4P13236 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.1■□□□□ 0.33
CCL4P13236 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL4P13236 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL4P13236 ANO7L1-203ENST00000602586 1720 ntBASIC17.1■□□□□ 0.33
CCL4P13236 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL4P13236 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL4P13236 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms