Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.99■□□□□ 0.31
TPRP12270 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.99■□□□□ 0.31
TPRP12270 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TPRP12270 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPRP12270 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.99■□□□□ 0.31
TPRP12270 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.99■□□□□ 0.31
TPRP12270 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.99■□□□□ 0.31
TPRP12270 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.99■□□□□ 0.31
TPRP12270 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPRP12270 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TPRP12270 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.99■□□□□ 0.31
TPRP12270 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TPRP12270 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPRP12270 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPRP12270 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.99■□□□□ 0.31
TPRP12270 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPRP12270 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.99■□□□□ 0.31
TPRP12270 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPRP12270 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPRP12270 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPRP12270 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.99■□□□□ 0.31
TPRP12270 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.99■□□□□ 0.31
TPRP12270 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPRP12270 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.99■□□□□ 0.31
TPRP12270 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.99■□□□□ 0.31
TPRP12270 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.99■□□□□ 0.31
TPRP12270 AL662799.1-202ENST00000614205 422 ntBASIC16.99■□□□□ 0.31
TPRP12270 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPRP12270 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPRP12270 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.98■□□□□ 0.31
TPRP12270 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
TPRP12270 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPRP12270 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPRP12270 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPRP12270 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TPRP12270 AC034236.2-201ENST00000606662 1610 ntBASIC16.98■□□□□ 0.31
TPRP12270 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPRP12270 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TPRP12270 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPRP12270 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.98■□□□□ 0.31
TPRP12270 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TPRP12270 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TPRP12270 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPRP12270 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.98■□□□□ 0.31
TPRP12270 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.98■□□□□ 0.31
TPRP12270 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPRP12270 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.98■□□□□ 0.31
TPRP12270 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.98■□□□□ 0.31
TPRP12270 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TPRP12270 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TPRP12270 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.98■□□□□ 0.31
TPRP12270 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TPRP12270 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TPRP12270 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPRP12270 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TPRP12270 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPRP12270 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPRP12270 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPRP12270 HCG4-201ENST00000418983 998 ntBASIC16.97■□□□□ 0.31
TPRP12270 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.97■□□□□ 0.31
TPRP12270 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.97■□□□□ 0.31
TPRP12270 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPRP12270 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.97■□□□□ 0.31
TPRP12270 AC092720.2-201ENST00000602388 1665 ntBASIC16.97■□□□□ 0.31
TPRP12270 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.97■□□□□ 0.31
TPRP12270 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPRP12270 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPRP12270 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TPRP12270 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPRP12270 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.97■□□□□ 0.31
TPRP12270 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPRP12270 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.97■□□□□ 0.31
TPRP12270 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPRP12270 CU639417.3-201ENST00000624240 1404 ntBASIC16.97■□□□□ 0.31
TPRP12270 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.97■□□□□ 0.31
TPRP12270 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPRP12270 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.97■□□□□ 0.31
TPRP12270 COX5BP8-201ENST00000416911 349 ntBASIC16.97■□□□□ 0.31
TPRP12270 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.97■□□□□ 0.31
TPRP12270 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.97■□□□□ 0.31
TPRP12270 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPRP12270 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPRP12270 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.97■□□□□ 0.31
TPRP12270 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPRP12270 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.97■□□□□ 0.31
TPRP12270 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
TPRP12270 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.97■□□□□ 0.31
TPRP12270 PCDHAC2-203ENST00000615316 3011 ntBASIC16.97■□□□□ 0.31
TPRP12270 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPRP12270 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPRP12270 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TPRP12270 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPRP12270 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.96■□□□□ 0.31
TPRP12270 ELK2AP-201ENST00000392510 1007 ntBASIC16.96■□□□□ 0.31
TPRP12270 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.96■□□□□ 0.31
TPRP12270 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.96■□□□□ 0.31
TPRP12270 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.96■□□□□ 0.31
TPRP12270 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.96■□□□□ 0.31
TPRP12270 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPRP12270 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms