Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.45■□□□□ 0.54
HLA-DQB2P05538 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 AL671277.2-201ENST00000458060 996 ntBASIC18.45■□□□□ 0.54
HLA-DQB2P05538 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 AL049597.2-201ENST00000565575 961 ntBASIC18.45■□□□□ 0.54
HLA-DQB2P05538 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 AC008687.5-201ENST00000593746 558 ntBASIC18.45■□□□□ 0.54
HLA-DQB2P05538 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.45■□□□□ 0.54
HLA-DQB2P05538 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB2P05538 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 AP000997.3-201ENST00000623333 2250 ntBASIC18.44■□□□□ 0.54
HLA-DQB2P05538 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 KRT18P48-201ENST00000434763 852 ntBASIC18.44■□□□□ 0.54
HLA-DQB2P05538 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 LINC01238-205ENST00000567549 1107 ntBASIC18.44■□□□□ 0.54
HLA-DQB2P05538 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 KRT89P-201ENST00000620027 1478 ntBASIC18.44■□□□□ 0.54
HLA-DQB2P05538 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DQB2P05538 FLJ13224-201ENST00000313737 1514 ntBASIC18.44■□□□□ 0.54
HLA-DQB2P05538 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 MIR662-201ENST00000384847 95 ntBASIC18.43■□□□□ 0.54
HLA-DQB2P05538 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 AC113404.2-201ENST00000507884 177 ntBASIC18.43■□□□□ 0.54
HLA-DQB2P05538 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 LINC00602-201ENST00000629776 2065 ntBASIC18.43■□□□□ 0.54
HLA-DQB2P05538 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB2P05538 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
HLA-DQB2P05538 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms