Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.71□□□□□ -0.22
HLA-DQA1P01909 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.71□□□□□ -0.22
HLA-DQA1P01909 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.71□□□□□ -0.22
HLA-DQA1P01909 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
HLA-DQA1P01909 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DQA1P01909 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.71□□□□□ -0.22
HLA-DQA1P01909 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DQA1P01909 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
HLA-DQA1P01909 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DQA1P01909 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DQA1P01909 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DQA1P01909 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DQA1P01909 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HLA-DQA1P01909 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.71□□□□□ -0.22
HLA-DQA1P01909 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.7□□□□□ -0.22
HLA-DQA1P01909 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.7□□□□□ -0.22
HLA-DQA1P01909 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 AC004911.1-201ENST00000416316 871 ntBASIC13.7□□□□□ -0.22
HLA-DQA1P01909 AC006015.1-201ENST00000429970 570 ntBASIC13.7□□□□□ -0.22
HLA-DQA1P01909 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HLA-DQA1P01909 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 AL596257.1-201ENST00000641463 2694 ntBASIC13.69□□□□□ -0.22
HLA-DQA1P01909 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DQA1P01909 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQA1P01909 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DQA1P01909 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms