Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFBP01127 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFBP01127 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
PDGFBP01127 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.2■□□□□ 0.5
PDGFBP01127 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.2■□□□□ 0.5
PDGFBP01127 PRSS29P-201ENST00000440800 595 ntBASIC18.2■□□□□ 0.5
PDGFBP01127 VN2R19P-201ENST00000442399 1052 ntBASIC18.2■□□□□ 0.5
PDGFBP01127 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.2■□□□□ 0.5
PDGFBP01127 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.2■□□□□ 0.5
PDGFBP01127 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PDGFBP01127 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.2■□□□□ 0.5
PDGFBP01127 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PDGFBP01127 AC004449.1-201ENST00000564240 433 ntBASIC18.2■□□□□ 0.5
PDGFBP01127 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PDGFBP01127 AC005498.2-205ENST00000593218 784 ntBASIC18.2■□□□□ 0.5
PDGFBP01127 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFBP01127 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.2■□□□□ 0.5
PDGFBP01127 AL035252.4-201ENST00000624174 288 ntBASIC18.2■□□□□ 0.5
PDGFBP01127 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFBP01127 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFBP01127 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.2■□□□□ 0.5
PDGFBP01127 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFBP01127 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PDGFBP01127 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.2■□□□□ 0.5
PDGFBP01127 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.2■□□□□ 0.5
PDGFBP01127 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFBP01127 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.19■□□□□ 0.5
PDGFBP01127 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFBP01127 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFBP01127 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFBP01127 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFBP01127 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDGFBP01127 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PDGFBP01127 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFBP01127 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFBP01127 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFBP01127 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDGFBP01127 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.19■□□□□ 0.5
PDGFBP01127 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFBP01127 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.19■□□□□ 0.5
PDGFBP01127 AC005034.1-201ENST00000426657 489 ntBASIC18.19■□□□□ 0.5
PDGFBP01127 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFBP01127 HCG4B-203ENST00000450128 991 ntBASIC18.19■□□□□ 0.5
PDGFBP01127 SDHAP2-201ENST00000455183 2001 ntBASIC18.19■□□□□ 0.5
PDGFBP01127 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.19■□□□□ 0.5
PDGFBP01127 AC108073.2-201ENST00000464002 357 ntBASIC18.19■□□□□ 0.5
PDGFBP01127 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFBP01127 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.19■□□□□ 0.5
PDGFBP01127 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.19■□□□□ 0.5
PDGFBP01127 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.19■□□□□ 0.5
PDGFBP01127 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.19■□□□□ 0.5
PDGFBP01127 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.19■□□□□ 0.5
PDGFBP01127 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
PDGFBP01127 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.19■□□□□ 0.5
PDGFBP01127 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.19■□□□□ 0.5
PDGFBP01127 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFBP01127 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PDGFBP01127 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFBP01127 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFBP01127 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFBP01127 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFBP01127 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDGFBP01127 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.18■□□□□ 0.5
PDGFBP01127 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PDGFBP01127 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFBP01127 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFBP01127 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFBP01127 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PDGFBP01127 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PDGFBP01127 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFBP01127 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFBP01127 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PDGFBP01127 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.18■□□□□ 0.5
PDGFBP01127 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFBP01127 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFBP01127 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFBP01127 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFBP01127 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.18■□□□□ 0.5
PDGFBP01127 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.18■□□□□ 0.5
PDGFBP01127 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.18■□□□□ 0.5
PDGFBP01127 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFBP01127 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.18■□□□□ 0.5
PDGFBP01127 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.18■□□□□ 0.5
PDGFBP01127 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.18■□□□□ 0.5
PDGFBP01127 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFBP01127 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFBP01127 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDGFBP01127 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PDGFBP01127 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFBP01127 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFBP01127 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFBP01127 PMPCAP1-201ENST00000508114 1576 ntBASIC18.17■□□□□ 0.5
PDGFBP01127 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFBP01127 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.17■□□□□ 0.5
PDGFBP01127 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.17■□□□□ 0.5
PDGFBP01127 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFBP01127 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.17■□□□□ 0.5
PDGFBP01127 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFBP01127 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDGFBP01127 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms