Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP1O94782 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP1O94782 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP1O94782 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP1O94782 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
USP1O94782 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP1O94782 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP1O94782 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP1O94782 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
USP1O94782 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP1O94782 TSPY14P-201ENST00000303979 915 ntBASIC18.42■□□□□ 0.54
USP1O94782 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP1O94782 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.42■□□□□ 0.54
USP1O94782 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.42■□□□□ 0.54
USP1O94782 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.42■□□□□ 0.54
USP1O94782 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.42■□□□□ 0.54
USP1O94782 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP1O94782 AC104390.1-201ENST00000555663 520 ntBASIC18.42■□□□□ 0.54
USP1O94782 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.42■□□□□ 0.54
USP1O94782 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
USP1O94782 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
USP1O94782 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
USP1O94782 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP1O94782 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP1O94782 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP1O94782 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
USP1O94782 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP1O94782 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP1O94782 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.42■□□□□ 0.54
USP1O94782 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
USP1O94782 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
USP1O94782 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP1O94782 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP1O94782 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP1O94782 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP1O94782 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP1O94782 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
USP1O94782 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP1O94782 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP1O94782 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.41■□□□□ 0.54
USP1O94782 BCL2-203ENST00000589955 5011 ntBASIC18.41■□□□□ 0.54
USP1O94782 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
USP1O94782 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP1O94782 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP1O94782 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
USP1O94782 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.41■□□□□ 0.54
USP1O94782 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.41■□□□□ 0.54
USP1O94782 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP1O94782 AC112497.1-201ENST00000624824 639 ntBASIC18.41■□□□□ 0.54
USP1O94782 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.41■□□□□ 0.54
USP1O94782 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP1O94782 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
USP1O94782 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP1O94782 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
USP1O94782 GNAS-203ENST00000306120 1878 ntBASIC18.41■□□□□ 0.54
USP1O94782 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
USP1O94782 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP1O94782 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP1O94782 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.41■□□□□ 0.54
USP1O94782 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP1O94782 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP1O94782 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
USP1O94782 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
USP1O94782 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
USP1O94782 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
USP1O94782 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
USP1O94782 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
USP1O94782 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
USP1O94782 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
USP1O94782 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.4■□□□□ 0.54
USP1O94782 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.4■□□□□ 0.54
USP1O94782 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.4■□□□□ 0.54
USP1O94782 EGLN1P1-201ENST00000531623 762 ntBASIC18.4■□□□□ 0.54
USP1O94782 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.4■□□□□ 0.54
USP1O94782 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
USP1O94782 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.4■□□□□ 0.54
USP1O94782 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
USP1O94782 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.4■□□□□ 0.54
USP1O94782 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.4■□□□□ 0.54
USP1O94782 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP1O94782 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.4■□□□□ 0.54
USP1O94782 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms