Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH16O75309 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.39■□□□□ 0.54
CDH16O75309 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CDH16O75309 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CDH16O75309 AC009102.3-201ENST00000623118 1491 ntBASIC18.39■□□□□ 0.54
CDH16O75309 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDH16O75309 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDH16O75309 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH16O75309 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH16O75309 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH16O75309 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CDH16O75309 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
CDH16O75309 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.53
CDH16O75309 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH16O75309 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CDH16O75309 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CDH16O75309 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CDH16O75309 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 AL023284.2-201ENST00000405850 579 ntBASIC18.39■□□□□ 0.53
CDH16O75309 MCCD1P1-208ENST00000445732 328 ntBASIC18.39■□□□□ 0.53
CDH16O75309 AP002982.1-201ENST00000492365 877 ntBASIC18.39■□□□□ 0.53
CDH16O75309 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 AC233263.1-201ENST00000578059 224 ntBASIC18.39■□□□□ 0.53
CDH16O75309 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.39■□□□□ 0.53
CDH16O75309 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.39■□□□□ 0.53
CDH16O75309 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CDH16O75309 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CDH16O75309 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH16O75309 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CDH16O75309 AC022211.2-201ENST00000585075 2527 ntBASIC18.39■□□□□ 0.53
CDH16O75309 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CDH16O75309 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH16O75309 LINC00602-201ENST00000629776 2065 ntBASIC18.38■□□□□ 0.53
CDH16O75309 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.38■□□□□ 0.53
CDH16O75309 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CDH16O75309 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDH16O75309 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH16O75309 AC099343.3-201ENST00000605834 2503 ntBASIC18.38■□□□□ 0.53
CDH16O75309 MIR149-201ENST00000384879 89 ntBASIC18.38■□□□□ 0.53
CDH16O75309 ESRRAP1-201ENST00000400596 1257 ntBASIC18.38■□□□□ 0.53
CDH16O75309 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH16O75309 FAM207BP-201ENST00000447172 505 ntBASIC18.38■□□□□ 0.53
CDH16O75309 RPS2P4-201ENST00000476944 856 ntBASIC18.38■□□□□ 0.53
CDH16O75309 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH16O75309 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.38■□□□□ 0.53
CDH16O75309 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CDH16O75309 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.38■□□□□ 0.53
CDH16O75309 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.38■□□□□ 0.53
CDH16O75309 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.38■□□□□ 0.53
CDH16O75309 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CDH16O75309 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDH16O75309 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 AL163051.1-201ENST00000569214 1512 ntBASIC18.38■□□□□ 0.53
CDH16O75309 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH16O75309 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH16O75309 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDH16O75309 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDH16O75309 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH16O75309 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH16O75309 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH16O75309 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDH16O75309 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms