Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LCMT2O60294 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LCMT2O60294 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.39■□□□□ 0.37
LCMT2O60294 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LCMT2O60294 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LCMT2O60294 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LCMT2O60294 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LCMT2O60294 AP003733.1-201ENST00000491725 852 ntBASIC17.39■□□□□ 0.37
LCMT2O60294 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.39■□□□□ 0.37
LCMT2O60294 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.39■□□□□ 0.37
LCMT2O60294 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.39■□□□□ 0.37
LCMT2O60294 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.39■□□□□ 0.37
LCMT2O60294 AL121956.5-201ENST00000625261 221 ntBASIC17.39■□□□□ 0.37
LCMT2O60294 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LCMT2O60294 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LCMT2O60294 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LCMT2O60294 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LCMT2O60294 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LCMT2O60294 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LCMT2O60294 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LCMT2O60294 AC093010.1-201ENST00000473625 1624 ntBASIC17.39■□□□□ 0.37
LCMT2O60294 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LCMT2O60294 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.37
LCMT2O60294 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.39■□□□□ 0.37
LCMT2O60294 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LCMT2O60294 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.38■□□□□ 0.37
LCMT2O60294 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LCMT2O60294 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
LCMT2O60294 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.38■□□□□ 0.37
LCMT2O60294 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.38■□□□□ 0.37
LCMT2O60294 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.38■□□□□ 0.37
LCMT2O60294 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.38■□□□□ 0.37
LCMT2O60294 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
LCMT2O60294 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.38■□□□□ 0.37
LCMT2O60294 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LCMT2O60294 AC005332.1-201ENST00000577698 1310 ntBASIC17.38■□□□□ 0.37
LCMT2O60294 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LCMT2O60294 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
LCMT2O60294 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
LCMT2O60294 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 LINC00602-201ENST00000629776 2065 ntBASIC17.38■□□□□ 0.37
LCMT2O60294 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCMT2O60294 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LCMT2O60294 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LCMT2O60294 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.37■□□□□ 0.37
LCMT2O60294 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LCMT2O60294 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LCMT2O60294 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LCMT2O60294 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LCMT2O60294 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LCMT2O60294 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LCMT2O60294 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LCMT2O60294 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.37■□□□□ 0.37
LCMT2O60294 AC132938.6-201ENST00000623828 1655 ntBASIC17.37■□□□□ 0.37
LCMT2O60294 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.37■□□□□ 0.37
LCMT2O60294 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LCMT2O60294 IGHGP-201ENST00000390555 1178 ntBASIC17.37■□□□□ 0.37
LCMT2O60294 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LCMT2O60294 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LCMT2O60294 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.37■□□□□ 0.37
LCMT2O60294 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.37■□□□□ 0.37
LCMT2O60294 AL645929.1-201ENST00000420084 975 ntBASIC17.37■□□□□ 0.37
LCMT2O60294 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LCMT2O60294 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.37■□□□□ 0.37
LCMT2O60294 AC113404.2-201ENST00000507884 177 ntBASIC17.37■□□□□ 0.37
LCMT2O60294 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.37■□□□□ 0.37
LCMT2O60294 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.37■□□□□ 0.37
LCMT2O60294 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.37■□□□□ 0.37
LCMT2O60294 AC005332.3-201ENST00000589904 676 ntBASIC17.37■□□□□ 0.37
LCMT2O60294 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LCMT2O60294 AC004263.2-201ENST00000617183 678 ntBASIC17.37■□□□□ 0.37
LCMT2O60294 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LCMT2O60294 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LCMT2O60294 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.37■□□□□ 0.37
LCMT2O60294 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LCMT2O60294 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LCMT2O60294 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LCMT2O60294 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LCMT2O60294 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LCMT2O60294 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LCMT2O60294 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LCMT2O60294 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LCMT2O60294 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms