Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SSSCA1O60232 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 PHGDH-209ENST00000641074 1780 ntBASIC14.87□□□□□ -0.03
SSSCA1O60232 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSSCA1O60232 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.87□□□□□ -0.03
SSSCA1O60232 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SSSCA1O60232 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.86□□□□□ -0.03
SSSCA1O60232 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
SSSCA1O60232 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SSSCA1O60232 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SSSCA1O60232 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SSSCA1O60232 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.86□□□□□ -0.03
SSSCA1O60232 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.86□□□□□ -0.03
SSSCA1O60232 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SSSCA1O60232 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.86□□□□□ -0.03
SSSCA1O60232 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.86□□□□□ -0.03
SSSCA1O60232 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SSSCA1O60232 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SSSCA1O60232 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.86□□□□□ -0.03
SSSCA1O60232 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SSSCA1O60232 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.86□□□□□ -0.03
SSSCA1O60232 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.86□□□□□ -0.03
SSSCA1O60232 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SSSCA1O60232 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SSSCA1O60232 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.86□□□□□ -0.03
SSSCA1O60232 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
SSSCA1O60232 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSSCA1O60232 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.85□□□□□ -0.03
SSSCA1O60232 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.85□□□□□ -0.03
SSSCA1O60232 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.85□□□□□ -0.03
SSSCA1O60232 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SSSCA1O60232 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.85□□□□□ -0.03
SSSCA1O60232 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.85□□□□□ -0.03
SSSCA1O60232 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
SSSCA1O60232 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.85□□□□□ -0.03
SSSCA1O60232 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
SSSCA1O60232 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.85□□□□□ -0.03
SSSCA1O60232 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.85□□□□□ -0.03
SSSCA1O60232 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.85□□□□□ -0.03
SSSCA1O60232 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.85□□□□□ -0.03
SSSCA1O60232 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 NKILA-202ENST00000614771 2598 ntBASIC14.85□□□□□ -0.03
SSSCA1O60232 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
SSSCA1O60232 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.85□□□□□ -0.03
SSSCA1O60232 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.85□□□□□ -0.03
SSSCA1O60232 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSSCA1O60232 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SSSCA1O60232 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms