Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PDE6DO43924 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PDE6DO43924 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PDE6DO43924 NALT1-201ENST00000429224 738 ntTSL 5 BASIC14.12□□□□□ -0.15
PDE6DO43924 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.12□□□□□ -0.15
PDE6DO43924 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.12□□□□□ -0.15
PDE6DO43924 DUX4L16-201ENST00000555130 1264 ntBASIC14.12□□□□□ -0.15
PDE6DO43924 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.12□□□□□ -0.15
PDE6DO43924 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.12□□□□□ -0.15
PDE6DO43924 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.12□□□□□ -0.15
PDE6DO43924 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.12□□□□□ -0.15
PDE6DO43924 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
PDE6DO43924 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.12□□□□□ -0.15
PDE6DO43924 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PDE6DO43924 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PDE6DO43924 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDE6DO43924 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDE6DO43924 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.12□□□□□ -0.15
PDE6DO43924 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDE6DO43924 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDE6DO43924 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDE6DO43924 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PDE6DO43924 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDE6DO43924 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PDE6DO43924 HTR7P1-201ENST00000538670 1336 ntBASIC14.12□□□□□ -0.15
PDE6DO43924 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDE6DO43924 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDE6DO43924 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.11□□□□□ -0.15
PDE6DO43924 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
PDE6DO43924 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.11□□□□□ -0.15
PDE6DO43924 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PDE6DO43924 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.11□□□□□ -0.15
PDE6DO43924 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PDE6DO43924 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.11□□□□□ -0.15
PDE6DO43924 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PDE6DO43924 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PDE6DO43924 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.11□□□□□ -0.15
PDE6DO43924 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.11□□□□□ -0.15
PDE6DO43924 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.11□□□□□ -0.15
PDE6DO43924 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PDE6DO43924 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.11□□□□□ -0.15
PDE6DO43924 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PDE6DO43924 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
PDE6DO43924 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.11□□□□□ -0.15
PDE6DO43924 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.11□□□□□ -0.15
PDE6DO43924 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.11□□□□□ -0.15
PDE6DO43924 AC131212.1-201ENST00000613771 668 ntBASIC14.11□□□□□ -0.15
PDE6DO43924 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PDE6DO43924 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDE6DO43924 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
PDE6DO43924 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
PDE6DO43924 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.1□□□□□ -0.15
PDE6DO43924 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.1□□□□□ -0.15
PDE6DO43924 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.1□□□□□ -0.15
PDE6DO43924 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.1□□□□□ -0.15
PDE6DO43924 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PDE6DO43924 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PDE6DO43924 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PDE6DO43924 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PDE6DO43924 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
PDE6DO43924 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.1□□□□□ -0.15
PDE6DO43924 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.1□□□□□ -0.15
PDE6DO43924 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PDE6DO43924 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms