Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRICKLE3O43900 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRICKLE3O43900 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PRICKLE3O43900 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.44■□□□□ 0.38
PRICKLE3O43900 UPK3BP1-201ENST00000428678 509 ntBASIC17.44■□□□□ 0.38
PRICKLE3O43900 CHCHD2P8-201ENST00000429873 447 ntBASIC17.44■□□□□ 0.38
PRICKLE3O43900 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.44■□□□□ 0.38
PRICKLE3O43900 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.44■□□□□ 0.38
PRICKLE3O43900 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
PRICKLE3O43900 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRICKLE3O43900 TSSC2-201ENST00000450217 709 ntBASIC17.44■□□□□ 0.38
PRICKLE3O43900 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.44■□□□□ 0.38
PRICKLE3O43900 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PRICKLE3O43900 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.44■□□□□ 0.38
PRICKLE3O43900 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.44■□□□□ 0.38
PRICKLE3O43900 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRICKLE3O43900 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRICKLE3O43900 AC069148.1-201ENST00000608741 768 ntBASIC17.44■□□□□ 0.38
PRICKLE3O43900 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PRICKLE3O43900 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRICKLE3O43900 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRICKLE3O43900 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRICKLE3O43900 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PRICKLE3O43900 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRICKLE3O43900 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.44■□□□□ 0.38
PRICKLE3O43900 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRICKLE3O43900 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
PRICKLE3O43900 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRICKLE3O43900 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PRICKLE3O43900 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PRICKLE3O43900 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRICKLE3O43900 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.44■□□□□ 0.38
PRICKLE3O43900 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
PRICKLE3O43900 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.43■□□□□ 0.38
PRICKLE3O43900 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PRICKLE3O43900 ATP5G2P1-201ENST00000433580 426 ntBASIC17.43■□□□□ 0.38
PRICKLE3O43900 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.43■□□□□ 0.38
PRICKLE3O43900 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
PRICKLE3O43900 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.43■□□□□ 0.38
PRICKLE3O43900 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.43■□□□□ 0.38
PRICKLE3O43900 DUTP2-201ENST00000519164 463 ntBASIC17.43■□□□□ 0.38
PRICKLE3O43900 MIR3180-1-201ENST00000580374 94 ntBASIC17.43■□□□□ 0.38
PRICKLE3O43900 MIR3180-3-201ENST00000584616 94 ntBASIC17.43■□□□□ 0.38
PRICKLE3O43900 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.43■□□□□ 0.38
PRICKLE3O43900 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PRICKLE3O43900 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PRICKLE3O43900 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.43■□□□□ 0.38
PRICKLE3O43900 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRICKLE3O43900 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRICKLE3O43900 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.42■□□□□ 0.38
PRICKLE3O43900 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRICKLE3O43900 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.42■□□□□ 0.38
PRICKLE3O43900 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRICKLE3O43900 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.42■□□□□ 0.38
PRICKLE3O43900 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRICKLE3O43900 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRICKLE3O43900 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRICKLE3O43900 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRICKLE3O43900 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.42■□□□□ 0.38
PRICKLE3O43900 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PRICKLE3O43900 AC135050.7-201ENST00000624508 2218 ntBASIC17.42■□□□□ 0.38
PRICKLE3O43900 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
PRICKLE3O43900 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRICKLE3O43900 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.42■□□□□ 0.38
PRICKLE3O43900 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRICKLE3O43900 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRICKLE3O43900 KRT18P65-201ENST00000439811 1286 ntBASIC17.42■□□□□ 0.38
PRICKLE3O43900 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.42■□□□□ 0.38
PRICKLE3O43900 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRICKLE3O43900 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.42■□□□□ 0.38
PRICKLE3O43900 AC090616.6-201ENST00000582640 721 ntBASIC17.42■□□□□ 0.38
PRICKLE3O43900 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.42■□□□□ 0.38
PRICKLE3O43900 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRICKLE3O43900 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.42■□□□□ 0.38
PRICKLE3O43900 AC009154.2-201ENST00000621177 724 ntBASIC17.42■□□□□ 0.38
PRICKLE3O43900 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.42■□□□□ 0.38
PRICKLE3O43900 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRICKLE3O43900 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
PRICKLE3O43900 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRICKLE3O43900 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
PRICKLE3O43900 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRICKLE3O43900 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms