Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SEMA3EO15041 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SEMA3EO15041 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SEMA3EO15041 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SEMA3EO15041 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.83■■□□□ 1.08
SEMA3EO15041 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SEMA3EO15041 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SEMA3EO15041 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SEMA3EO15041 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.82■■□□□ 1.08
SEMA3EO15041 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SEMA3EO15041 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA3EO15041 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA3EO15041 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA3EO15041 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA3EO15041 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.82■■□□□ 1.08
SEMA3EO15041 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.82■■□□□ 1.08
SEMA3EO15041 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA3EO15041 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.82■■□□□ 1.08
SEMA3EO15041 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA3EO15041 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA3EO15041 AL662844.1-201ENST00000546340 181 ntBASIC21.82■■□□□ 1.08
SEMA3EO15041 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.82■■□□□ 1.08
SEMA3EO15041 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.82■■□□□ 1.08
SEMA3EO15041 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA3EO15041 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA3EO15041 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.82■■□□□ 1.08
SEMA3EO15041 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA3EO15041 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA3EO15041 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA3EO15041 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA3EO15041 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
SEMA3EO15041 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEMA3EO15041 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SEMA3EO15041 AC097374.2-201ENST00000618617 1306 ntBASIC21.81■■□□□ 1.08
SEMA3EO15041 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.81■■□□□ 1.08
SEMA3EO15041 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA3EO15041 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA3EO15041 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA3EO15041 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.81■■□□□ 1.08
SEMA3EO15041 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA3EO15041 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.81■■□□□ 1.08
SEMA3EO15041 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA3EO15041 AC132008.2-207ENST00000454517 770 ntBASIC21.81■■□□□ 1.08
SEMA3EO15041 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.81■■□□□ 1.08
SEMA3EO15041 DUTP2-201ENST00000519164 463 ntBASIC21.81■■□□□ 1.08
SEMA3EO15041 SLC25A6P4-201ENST00000586535 553 ntBASIC21.81■■□□□ 1.08
SEMA3EO15041 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA3EO15041 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA3EO15041 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SEMA3EO15041 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.81■■□□□ 1.08
SEMA3EO15041 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA3EO15041 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SEMA3EO15041 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA3EO15041 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA3EO15041 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA3EO15041 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SEMA3EO15041 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SEMA3EO15041 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.8■■□□□ 1.08
SEMA3EO15041 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.8■■□□□ 1.08
SEMA3EO15041 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SEMA3EO15041 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SEMA3EO15041 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SEMA3EO15041 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.8■■□□□ 1.08
SEMA3EO15041 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SEMA3EO15041 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.8■■□□□ 1.08
SEMA3EO15041 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SEMA3EO15041 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SEMA3EO15041 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SEMA3EO15041 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.8■■□□□ 1.08
SEMA3EO15041 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.8■■□□□ 1.08
SEMA3EO15041 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.8■■□□□ 1.08
SEMA3EO15041 RNF165-205ENST00000588679 2904 ntBASIC21.8■■□□□ 1.08
SEMA3EO15041 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.8■■□□□ 1.08
SEMA3EO15041 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SEMA3EO15041 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SEMA3EO15041 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SEMA3EO15041 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
SEMA3EO15041 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SEMA3EO15041 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.8■■□□□ 1.08
SEMA3EO15041 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SEMA3EO15041 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.8■■□□□ 1.08
SEMA3EO15041 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SEMA3EO15041 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.8■■□□□ 1.08
SEMA3EO15041 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SEMA3EO15041 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SEMA3EO15041 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SEMA3EO15041 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.79■■□□□ 1.08
SEMA3EO15041 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SEMA3EO15041 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SEMA3EO15041 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SEMA3EO15041 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SEMA3EO15041 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SEMA3EO15041 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.79■■□□□ 1.08
SEMA3EO15041 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SEMA3EO15041 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
SEMA3EO15041 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SEMA3EO15041 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.79■■□□□ 1.08
SEMA3EO15041 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.79■■□□□ 1.08
SEMA3EO15041 RBM17P3-201ENST00000417687 1192 ntBASIC21.79■■□□□ 1.08
SEMA3EO15041 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms