Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC85CA6NKD9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC85CA6NKD9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC85CA6NKD9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.02■□□□□ 0.79
CCDC85CA6NKD9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
CCDC85CA6NKD9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC85CA6NKD9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 KRT8P47-201ENST00000604727 1398 ntBASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 AC140878.1-201ENST00000565277 250 ntBASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC85CA6NKD9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85CA6NKD9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20■□□□□ 0.79
CCDC85CA6NKD9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85CA6NKD9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85CA6NKD9 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC85CA6NKD9 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC85CA6NKD9 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85CA6NKD9 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85CA6NKD9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20■□□□□ 0.79
CCDC85CA6NKD9 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85CA6NKD9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20■□□□□ 0.79
CCDC85CA6NKD9 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20■□□□□ 0.79
CCDC85CA6NKD9 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC85CA6NKD9 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC85CA6NKD9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
CCDC85CA6NKD9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC85CA6NKD9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20■□□□□ 0.79
CCDC85CA6NKD9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85CA6NKD9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20■□□□□ 0.79
CCDC85CA6NKD9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85CA6NKD9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85CA6NKD9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85CA6NKD9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 SPDYE21P-201ENST00000413323 827 ntBASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 AC004233.3-201ENST00000607794 1269 ntBASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC85CA6NKD9 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 FEM1AP4-201ENST00000443167 1987 ntBASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 AL512356.2-201ENST00000546955 174 ntBASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC85CA6NKD9 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms