Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC66A2RUB6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 PKD1P5-201ENST00000532415 10291 ntBASIC19.72■□□□□ 0.75
CCDC66A2RUB6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 AC133681.1-201ENST00000465482 601 ntBASIC19.72■□□□□ 0.75
CCDC66A2RUB6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 CD99P1-205ENST00000527459 561 ntBASIC19.72■□□□□ 0.75
CCDC66A2RUB6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CCDC66A2RUB6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 AL162741.1-201ENST00000565563 1558 ntBASIC19.71■□□□□ 0.75
CCDC66A2RUB6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 AC124016.1-201ENST00000609552 612 ntBASIC19.71■□□□□ 0.75
CCDC66A2RUB6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 KRT8P32-201ENST00000512863 1461 ntBASIC19.71■□□□□ 0.75
CCDC66A2RUB6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CCDC66A2RUB6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 KRT8P3-201ENST00000519669 1449 ntBASIC19.7■□□□□ 0.74
CCDC66A2RUB6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 NIFKP9-201ENST00000419265 221 ntBASIC19.7■□□□□ 0.74
CCDC66A2RUB6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms