Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 FAM8A6P-201ENST00000407496 1135 ntBASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 AC112907.2-201ENST00000448639 330 ntBASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 AC012317.2-201ENST00000623305 2251 ntBASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV5S1A1TA0A578 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 AC026471.1-201ENST00000564629 3026 ntBASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 AC004263.2-201ENST00000617183 678 ntBASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 LINC00896-202ENST00000609602 2128 ntBASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV5S1A1TA0A578 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 VENTXP5-201ENST00000523979 775 ntBASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 AC083849.1-201ENST00000615227 514 ntBASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TCRBV5S1A1TA0A578 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV5S1A1TA0A578 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms