Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 AL356309.3-201ENST00000624132 1934 ntBASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRAV13-2A0A0B4J235 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRAV13-2A0A0B4J235 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TRAV13-2A0A0B4J235 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRAV13-2A0A0B4J235 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRAV13-2A0A0B4J235 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
TRAV13-2A0A0B4J235 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TRAV13-2A0A0B4J235 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.02□□□□□ -0.48
TRAV13-2A0A0B4J235 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
TRAV13-2A0A0B4J235 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
TRAV13-2A0A0B4J235 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 AL096828.2-201ENST00000567259 1965 ntBASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 AC073210.2-201ENST00000430369 194 ntBASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 TSPY23P-201ENST00000440136 739 ntBASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 RAP2CP1-201ENST00000605103 478 ntBASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 AL365209.1-201ENST00000624418 6473 ntBASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRAV13-2A0A0B4J235 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 AC067930.6-201ENST00000623257 4947 ntBASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 MYLKP1-201ENST00000509077 1580 ntBASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 NORAD-201ENST00000565493 5339 ntBASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 AK1-201ENST00000223836 736 ntTSL 3 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 BET1L-204ENST00000410108 637 ntTSL 3 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 AL355472.2-201ENST00000422958 438 ntBASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 UQCRFS1P1-201ENST00000435169 820 ntBASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 KRT18P16-201ENST00000510337 1294 ntBASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 PLLP-204ENST00000569059 665 ntTSL 3 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms