Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 CHCHD2P8-201ENST00000429873 447 ntBASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 TSSC2-201ENST00000450217 709 ntBASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DNMT3AQ9Y6K1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 ATP5G2P1-201ENST00000433580 426 ntBASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 FZD10-202ENST00000539839 3282 ntBASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.82■□□□□ 0.44
DNMT3AQ9Y6K1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DNMT3AQ9Y6K1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 TSPY12P-201ENST00000421279 868 ntBASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 RN7SL606P-201ENST00000472779 293 ntBASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 IGHV3-41-201ENST00000613121 348 ntBASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.8■□□□□ 0.44
DNMT3AQ9Y6K1 AC009154.2-201ENST00000621177 724 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms