Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 MIR149-201ENST00000384879 89 ntBASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 C20orf181-201ENST00000623918 480 ntBASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 AP000867.4-201ENST00000641616 219 ntBASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PTCH2Q9Y6C5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 AC099343.3-201ENST00000605834 2503 ntBASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 AC125437.2-201ENST00000625180 2167 ntBASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 AC073621.1-201ENST00000392730 636 ntBASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 KRT18P41-201ENST00000518924 1277 ntBASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 AL078644.1-201ENST00000609881 752 ntBASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 PGM5P2-202ENST00000637225 1043 ntBASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTCH2Q9Y6C5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.46■□□□□ 0.87
PTCH2Q9Y6C5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms