Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
CDC42BPBQ9Y5S2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC27.39■■□□□ 1.98
CDC42BPBQ9Y5S2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CDC42BPBQ9Y5S2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
CDC42BPBQ9Y5S2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CDC42BPBQ9Y5S2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CDC42BPBQ9Y5S2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CDC42BPBQ9Y5S2 COA5-202ENST00000409997 557 ntTSL 4 BASIC27.39■■□□□ 1.98
CDC42BPBQ9Y5S2 ELK2BP-201ENST00000415014 1224 ntBASIC27.39■■□□□ 1.98
CDC42BPBQ9Y5S2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC27.39■■□□□ 1.98
CDC42BPBQ9Y5S2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC27.39■■□□□ 1.98
CDC42BPBQ9Y5S2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CDC42BPBQ9Y5S2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
CDC42BPBQ9Y5S2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CDC42BPBQ9Y5S2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC27.39■■□□□ 1.98
CDC42BPBQ9Y5S2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
CDC42BPBQ9Y5S2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC27.39■■□□□ 1.97
CDC42BPBQ9Y5S2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 HNRNPA1P28-201ENST00000424481 961 ntBASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 AC148477.5-201ENST00000625164 1645 ntBASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 AC064836.3-201ENST00000607928 673 ntBASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC27.38■■□□□ 1.97
CDC42BPBQ9Y5S2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 AC022898.2-201ENST00000616822 1312 ntBASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC27.37■■□□□ 1.97
CDC42BPBQ9Y5S2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
CDC42BPBQ9Y5S2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC27.36■■□□□ 1.97
CDC42BPBQ9Y5S2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
CDC42BPBQ9Y5S2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC27.36■■□□□ 1.97
CDC42BPBQ9Y5S2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC27.36■■□□□ 1.97
CDC42BPBQ9Y5S2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC27.36■■□□□ 1.97
CDC42BPBQ9Y5S2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC27.36■■□□□ 1.97
CDC42BPBQ9Y5S2 AC002310.6-201ENST00000624451 1377 ntBASIC27.36■■□□□ 1.97
CDC42BPBQ9Y5S2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CDC42BPBQ9Y5S2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CDC42BPBQ9Y5S2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CDC42BPBQ9Y5S2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CDC42BPBQ9Y5S2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC27.36■■□□□ 1.97
CDC42BPBQ9Y5S2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC27.36■■□□□ 1.97
CDC42BPBQ9Y5S2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC27.36■■□□□ 1.97
CDC42BPBQ9Y5S2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC27.35■■□□□ 1.97
CDC42BPBQ9Y5S2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CDC42BPBQ9Y5S2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC27.35■■□□□ 1.97
CDC42BPBQ9Y5S2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC27.35■■□□□ 1.97
CDC42BPBQ9Y5S2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CDC42BPBQ9Y5S2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
CDC42BPBQ9Y5S2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
CDC42BPBQ9Y5S2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
CDC42BPBQ9Y5S2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC27.35■■□□□ 1.97
CDC42BPBQ9Y5S2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC27.35■■□□□ 1.97
CDC42BPBQ9Y5S2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC27.35■■□□□ 1.97
CDC42BPBQ9Y5S2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC27.35■■□□□ 1.97
CDC42BPBQ9Y5S2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC27.35■■□□□ 1.97
CDC42BPBQ9Y5S2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC27.35■■□□□ 1.97
CDC42BPBQ9Y5S2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
CDC42BPBQ9Y5S2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC27.35■■□□□ 1.97
CDC42BPBQ9Y5S2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
CDC42BPBQ9Y5S2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms