Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 AL138966.2-201ENST00000621997 464 ntBASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 AC007613.1-201ENST00000572811 2597 ntBASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
VPS9D1Q9Y2B5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 AL024508.2-201ENST00000607749 1894 ntBASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 NOC2LP2-201ENST00000407594 1944 ntBASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 AC093010.1-201ENST00000473625 1624 ntBASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
VPS9D1Q9Y2B5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 PVRIG2P-201ENST00000435460 978 ntBASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VPS9D1Q9Y2B5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VPS9D1Q9Y2B5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms