Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNTN3Q9P232 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.56■□□□□ 0.72
CNTN3Q9P232 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CNTN3Q9P232 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNTN3Q9P232 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.56■□□□□ 0.72
CNTN3Q9P232 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.56■□□□□ 0.72
CNTN3Q9P232 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.56■□□□□ 0.72
CNTN3Q9P232 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.56■□□□□ 0.72
CNTN3Q9P232 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNTN3Q9P232 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNTN3Q9P232 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNTN3Q9P232 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNTN3Q9P232 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNTN3Q9P232 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.56■□□□□ 0.72
CNTN3Q9P232 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNTN3Q9P232 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNTN3Q9P232 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNTN3Q9P232 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.55■□□□□ 0.72
CNTN3Q9P232 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.55■□□□□ 0.72
CNTN3Q9P232 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNTN3Q9P232 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CNTN3Q9P232 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNTN3Q9P232 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNTN3Q9P232 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNTN3Q9P232 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNTN3Q9P232 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CNTN3Q9P232 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNTN3Q9P232 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.55■□□□□ 0.72
CNTN3Q9P232 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.55■□□□□ 0.72
CNTN3Q9P232 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CNTN3Q9P232 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.55■□□□□ 0.72
CNTN3Q9P232 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.55■□□□□ 0.72
CNTN3Q9P232 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CNTN3Q9P232 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.55■□□□□ 0.72
CNTN3Q9P232 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.55■□□□□ 0.72
CNTN3Q9P232 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CNTN3Q9P232 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNTN3Q9P232 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.55■□□□□ 0.72
CNTN3Q9P232 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNTN3Q9P232 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNTN3Q9P232 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNTN3Q9P232 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNTN3Q9P232 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNTN3Q9P232 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.54■□□□□ 0.72
CNTN3Q9P232 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNTN3Q9P232 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CNTN3Q9P232 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNTN3Q9P232 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
CNTN3Q9P232 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNTN3Q9P232 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNTN3Q9P232 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNTN3Q9P232 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CNTN3Q9P232 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNTN3Q9P232 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CNTN3Q9P232 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CNTN3Q9P232 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.54■□□□□ 0.72
CNTN3Q9P232 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.54■□□□□ 0.72
CNTN3Q9P232 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.54■□□□□ 0.72
CNTN3Q9P232 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.54■□□□□ 0.72
CNTN3Q9P232 AC132938.6-201ENST00000623828 1655 ntBASIC19.54■□□□□ 0.72
CNTN3Q9P232 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNTN3Q9P232 NSUN5P1-202ENST00000421140 1535 ntBASIC19.54■□□□□ 0.72
CNTN3Q9P232 NSUN5P2-203ENST00000457352 1529 ntBASIC19.54■□□□□ 0.72
CNTN3Q9P232 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNTN3Q9P232 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNTN3Q9P232 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNTN3Q9P232 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.54■□□□□ 0.72
CNTN3Q9P232 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNTN3Q9P232 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNTN3Q9P232 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNTN3Q9P232 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNTN3Q9P232 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTN3Q9P232 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.53■□□□□ 0.72
CNTN3Q9P232 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.53■□□□□ 0.72
CNTN3Q9P232 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CNTN3Q9P232 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTN3Q9P232 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTN3Q9P232 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CNTN3Q9P232 PHGDH-209ENST00000641074 1780 ntBASIC19.53■□□□□ 0.72
CNTN3Q9P232 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTN3Q9P232 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CNTN3Q9P232 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CNTN3Q9P232 TSPY19P-201ENST00000418461 509 ntBASIC19.53■□□□□ 0.72
CNTN3Q9P232 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.53■□□□□ 0.72
CNTN3Q9P232 TSPY18P-201ENST00000441642 509 ntBASIC19.53■□□□□ 0.72
CNTN3Q9P232 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.53■□□□□ 0.72
CNTN3Q9P232 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNTN3Q9P232 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CNTN3Q9P232 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.53■□□□□ 0.72
CNTN3Q9P232 FOSL1P1-201ENST00000511041 816 ntBASIC19.53■□□□□ 0.72
CNTN3Q9P232 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.53■□□□□ 0.72
CNTN3Q9P232 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.53■□□□□ 0.72
CNTN3Q9P232 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNTN3Q9P232 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.53■□□□□ 0.72
CNTN3Q9P232 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTN3Q9P232 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTN3Q9P232 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNTN3Q9P232 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CNTN3Q9P232 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNTN3Q9P232 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms