Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBP1Q9NZI7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
UBP1Q9NZI7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.58■□□□□ 0.57
UBP1Q9NZI7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBP1Q9NZI7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
UBP1Q9NZI7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.58■□□□□ 0.56
UBP1Q9NZI7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.58■□□□□ 0.56
UBP1Q9NZI7 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.58■□□□□ 0.56
UBP1Q9NZI7 AL441883.1-201ENST00000566170 1045 ntBASIC18.58■□□□□ 0.56
UBP1Q9NZI7 MIR3917-201ENST00000580971 93 ntBASIC18.58■□□□□ 0.56
UBP1Q9NZI7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.58■□□□□ 0.56
UBP1Q9NZI7 AC139887.4-201ENST00000607877 719 ntBASIC18.58■□□□□ 0.56
UBP1Q9NZI7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.58■□□□□ 0.56
UBP1Q9NZI7 AC092865.7-201ENST00000641832 219 ntBASIC18.58■□□□□ 0.56
UBP1Q9NZI7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBP1Q9NZI7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.58■□□□□ 0.56
UBP1Q9NZI7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBP1Q9NZI7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBP1Q9NZI7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
UBP1Q9NZI7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBP1Q9NZI7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBP1Q9NZI7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBP1Q9NZI7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UBP1Q9NZI7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.58■□□□□ 0.56
UBP1Q9NZI7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBP1Q9NZI7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBP1Q9NZI7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 AC005332.8-201ENST00000622750 2735 ntBASIC18.57■□□□□ 0.56
UBP1Q9NZI7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 AP000523.1-201ENST00000398242 1049 ntBASIC18.57■□□□□ 0.56
UBP1Q9NZI7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 COX11P1-201ENST00000489116 835 ntBASIC18.57■□□□□ 0.56
UBP1Q9NZI7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 AC011558.1-201ENST00000623459 338 ntBASIC18.57■□□□□ 0.56
UBP1Q9NZI7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBP1Q9NZI7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.56■□□□□ 0.56
UBP1Q9NZI7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 AC009065.1-201ENST00000564055 1225 ntBASIC18.56■□□□□ 0.56
UBP1Q9NZI7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 AL024508.2-201ENST00000607749 1894 ntBASIC18.56■□□□□ 0.56
UBP1Q9NZI7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBP1Q9NZI7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 FZD10-202ENST00000539839 3282 ntBASIC18.55■□□□□ 0.56
UBP1Q9NZI7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 AC117947.1-201ENST00000427448 529 ntBASIC18.55■□□□□ 0.56
UBP1Q9NZI7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 MIR3180-4-201ENST00000582223 153 ntBASIC18.55■□□□□ 0.56
UBP1Q9NZI7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms