Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PARPBPQ9NWS1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 CROCCP1-201ENST00000426910 5675 ntBASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 LTB4R2-202ENST00000528054 3092 ntBASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 AC020916.1-201ENST00000587762 1774 ntBASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.3■□□□□ 0.2
PARPBPQ9NWS1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 AC112907.2-201ENST00000448639 330 ntBASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 NTF6B-201ENST00000591913 560 ntBASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 AC010331.1-201ENST00000611423 582 ntBASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PARPBPQ9NWS1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PARPBPQ9NWS1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms