Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 AC135776.1-201ENST00000319817 2481 ntBASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CUEDC1Q9NWM3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 GMCL1P1-201ENST00000463439 1581 ntBASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 PCED1CP-201ENST00000419887 785 ntBASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.62■□□□□ 0.41
CUEDC1Q9NWM3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 HBZP1-201ENST00000354915 429 ntBASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 AC083849.1-201ENST00000615227 514 ntBASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CUEDC1Q9NWM3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 HLA-F-220ENST00000434407 884 ntBASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 AL671277.2-201ENST00000458060 996 ntBASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 VENTXP5-201ENST00000523979 775 ntBASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.6■□□□□ 0.41
CUEDC1Q9NWM3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms