Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CSNK1G1Q9HCP0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
CSNK1G1Q9HCP0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G1Q9HCP0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G1Q9HCP0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G1Q9HCP0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CSNK1G1Q9HCP0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G1Q9HCP0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G1Q9HCP0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G1Q9HCP0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CSNK1G1Q9HCP0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.99■□□□□ 0.63
CSNK1G1Q9HCP0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G1Q9HCP0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1G1Q9HCP0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 AC104819.1-201ENST00000504587 486 ntBASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 AC112698.1-201ENST00000510299 916 ntBASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.98■□□□□ 0.63
CSNK1G1Q9HCP0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 AC074051.2-201ENST00000565115 352 ntBASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 AC005336.2-201ENST00000593183 939 ntBASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1G1Q9HCP0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms