Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 RNU6-907P-201ENST00000390924 102 ntBASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 RNF11P2-201ENST00000427702 440 ntBASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 AC009263.1-201ENST00000441193 1239 ntBASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 XKRY2-201ENST00000442362 1093 ntBASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 MTND5P20-201ENST00000448677 143 ntBASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 RAB30-203ENST00000525117 937 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 AEBP2-207ENST00000541908 975 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 AL442663.2-201ENST00000554385 511 ntBASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 AL669942.2-201ENST00000620352 697 ntBASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 AC024940.5-201ENST00000622889 474 ntBASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 AC092656.1-203ENST00000624134 423 ntBASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 AP000851.2-201ENST00000629499 721 ntTSL 3 BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 AC013391.3-201ENST00000567484 1456 ntBASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP3-3Q9BYR6 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 KRTAP4-5-201ENST00000343246 879 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 RNU5E-10P-201ENST00000363506 118 ntBASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 VN1R13P-201ENST00000406212 885 ntBASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 AL356488.1-201ENST00000429752 609 ntBASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 AC018641.1-201ENST00000435950 796 ntBASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 NAP1L1P3-201ENST00000462291 880 ntBASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 AC026774.2-201ENST00000513990 1098 ntBASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 AC090539.2-201ENST00000523425 671 ntBASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 AC113143.1-201ENST00000534670 301 ntTSL 2 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 LDHC-204ENST00000536880 957 ntTSL 5 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 AC005244.1-201ENST00000582566 339 ntBASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 AC103724.4-201ENST00000605981 292 ntBASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 AP006248.3-201ENST00000623580 594 ntBASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 AC005609.3-201ENST00000624566 577 ntBASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 THAP5-201ENST00000313516 1568 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 PYHIN1-201ENST00000368135 1662 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 RAB11FIP1P1-201ENST00000438337 1762 ntBASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 TMEM2-206ENST00000396272 1437 ntTSL 2 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
KRTAP3-3Q9BYR6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
KRTAP3-3Q9BYR6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP3-3Q9BYR6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP3-3Q9BYR6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
KRTAP3-3Q9BYR6 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC11.34□□□□□ -0.59
KRTAP3-3Q9BYR6 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP3-3Q9BYR6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP3-3Q9BYR6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP3-3Q9BYR6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP3-3Q9BYR6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP3-3Q9BYR6 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP3-3Q9BYR6 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms