Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 FSCN1P1-201ENST00000568912 1481 ntBASIC17.33■□□□□ 0.37
CGREF1Q99674 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CGREF1Q99674 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.33■□□□□ 0.36
CGREF1Q99674 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.33■□□□□ 0.36
CGREF1Q99674 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CGREF1Q99674 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CGREF1Q99674 KRT18P6-201ENST00000555540 1265 ntBASIC17.33■□□□□ 0.36
CGREF1Q99674 RARRES2P10-201ENST00000564312 460 ntBASIC17.33■□□□□ 0.36
CGREF1Q99674 AC006058.3-201ENST00000606217 1069 ntBASIC17.33■□□□□ 0.36
CGREF1Q99674 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CGREF1Q99674 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CGREF1Q99674 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CGREF1Q99674 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CGREF1Q99674 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CGREF1Q99674 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CGREF1Q99674 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CGREF1Q99674 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CGREF1Q99674 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CGREF1Q99674 AC009102.3-201ENST00000623118 1491 ntBASIC17.32■□□□□ 0.36
CGREF1Q99674 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CGREF1Q99674 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CGREF1Q99674 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CGREF1Q99674 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CGREF1Q99674 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.32■□□□□ 0.36
CGREF1Q99674 AC096733.2-201ENST00000609937 1394 ntBASIC17.32■□□□□ 0.36
CGREF1Q99674 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CGREF1Q99674 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.32■□□□□ 0.36
CGREF1Q99674 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CGREF1Q99674 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.32■□□□□ 0.36
CGREF1Q99674 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.32■□□□□ 0.36
CGREF1Q99674 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.32■□□□□ 0.36
CGREF1Q99674 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.32■□□□□ 0.36
CGREF1Q99674 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.32■□□□□ 0.36
CGREF1Q99674 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.32■□□□□ 0.36
CGREF1Q99674 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.32■□□□□ 0.36
CGREF1Q99674 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.32■□□□□ 0.36
CGREF1Q99674 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CGREF1Q99674 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.32■□□□□ 0.36
CGREF1Q99674 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CGREF1Q99674 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.32■□□□□ 0.36
CGREF1Q99674 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CGREF1Q99674 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.32■□□□□ 0.36
CGREF1Q99674 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CGREF1Q99674 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.32■□□□□ 0.36
CGREF1Q99674 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CGREF1Q99674 KRT18P55-202ENST00000578578 1546 ntBASIC17.31■□□□□ 0.36
CGREF1Q99674 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CGREF1Q99674 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CGREF1Q99674 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CGREF1Q99674 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CGREF1Q99674 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 PP12613-201ENST00000424958 2230 ntBASIC17.31■□□□□ 0.36
CGREF1Q99674 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CGREF1Q99674 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 AC108860.2-201ENST00000562760 2183 ntBASIC17.31■□□□□ 0.36
CGREF1Q99674 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.31■□□□□ 0.36
CGREF1Q99674 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.31■□□□□ 0.36
CGREF1Q99674 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CGREF1Q99674 MIR149-201ENST00000384879 89 ntBASIC17.31■□□□□ 0.36
CGREF1Q99674 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 C1QBPP2-201ENST00000528754 825 ntBASIC17.31■□□□□ 0.36
CGREF1Q99674 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.31■□□□□ 0.36
CGREF1Q99674 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.31■□□□□ 0.36
CGREF1Q99674 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.31■□□□□ 0.36
CGREF1Q99674 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.31■□□□□ 0.36
CGREF1Q99674 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CGREF1Q99674 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.31■□□□□ 0.36
CGREF1Q99674 AC093010.1-201ENST00000473625 1624 ntBASIC17.31■□□□□ 0.36
CGREF1Q99674 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.31■□□□□ 0.36
CGREF1Q99674 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CGREF1Q99674 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CGREF1Q99674 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.3■□□□□ 0.36
CGREF1Q99674 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CGREF1Q99674 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CGREF1Q99674 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CGREF1Q99674 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.3■□□□□ 0.36
CGREF1Q99674 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.3■□□□□ 0.36
CGREF1Q99674 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.3■□□□□ 0.36
CGREF1Q99674 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CGREF1Q99674 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.3■□□□□ 0.36
CGREF1Q99674 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CGREF1Q99674 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.3■□□□□ 0.36
CGREF1Q99674 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.3■□□□□ 0.36
CGREF1Q99674 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms