Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.62■□□□□ 0.25
SNX18Q96RF0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.62■□□□□ 0.25
SNX18Q96RF0 TSPY15P-201ENST00000457163 923 ntBASIC16.62■□□□□ 0.25
SNX18Q96RF0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.62■□□□□ 0.25
SNX18Q96RF0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.62■□□□□ 0.25
SNX18Q96RF0 AC026471.5-201ENST00000615068 467 ntBASIC16.62■□□□□ 0.25
SNX18Q96RF0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SNX18Q96RF0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX18Q96RF0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
SNX18Q96RF0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SNX18Q96RF0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.62■□□□□ 0.25
SNX18Q96RF0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.62■□□□□ 0.25
SNX18Q96RF0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNX18Q96RF0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX18Q96RF0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.62■□□□□ 0.25
SNX18Q96RF0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SNX18Q96RF0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX18Q96RF0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX18Q96RF0 AC018695.7-201ENST00000624587 2492 ntBASIC16.61■□□□□ 0.25
SNX18Q96RF0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX18Q96RF0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.61■□□□□ 0.25
SNX18Q96RF0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX18Q96RF0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX18Q96RF0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.61■□□□□ 0.25
SNX18Q96RF0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX18Q96RF0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX18Q96RF0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX18Q96RF0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.61■□□□□ 0.25
SNX18Q96RF0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SNX18Q96RF0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX18Q96RF0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX18Q96RF0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SNX18Q96RF0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX18Q96RF0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNX18Q96RF0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX18Q96RF0 AL355355.2-201ENST00000442321 338 ntBASIC16.61■□□□□ 0.25
SNX18Q96RF0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.61■□□□□ 0.25
SNX18Q96RF0 AL355075.4-201ENST00000554988 638 ntBASIC16.61■□□□□ 0.25
SNX18Q96RF0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.61■□□□□ 0.25
SNX18Q96RF0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.61■□□□□ 0.25
SNX18Q96RF0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.61■□□□□ 0.25
SNX18Q96RF0 CD177P1-201ENST00000606252 935 ntBASIC16.61■□□□□ 0.25
SNX18Q96RF0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX18Q96RF0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SNX18Q96RF0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX18Q96RF0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.61■□□□□ 0.25
SNX18Q96RF0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
SNX18Q96RF0 AL499627.1-201ENST00000569373 2188 ntBASIC16.61■□□□□ 0.25
SNX18Q96RF0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.61■□□□□ 0.25
SNX18Q96RF0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX18Q96RF0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX18Q96RF0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX18Q96RF0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX18Q96RF0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX18Q96RF0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX18Q96RF0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX18Q96RF0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX18Q96RF0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNX18Q96RF0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNX18Q96RF0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 FAM197Y1-201ENST00000421178 764 ntBASIC16.6■□□□□ 0.25
SNX18Q96RF0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNX18Q96RF0 NUDT16P1-203ENST00000513809 620 ntBASIC16.6■□□□□ 0.25
SNX18Q96RF0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 AP003071.4-201ENST00000562276 1284 ntBASIC16.6■□□□□ 0.25
SNX18Q96RF0 AC133561.5-201ENST00000635547 218 ntBASIC16.6■□□□□ 0.25
SNX18Q96RF0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNX18Q96RF0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNX18Q96RF0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNX18Q96RF0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX18Q96RF0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX18Q96RF0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 MYLKP1-201ENST00000509077 1580 ntBASIC16.6■□□□□ 0.25
SNX18Q96RF0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SNX18Q96RF0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX18Q96RF0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX18Q96RF0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.59■□□□□ 0.25
SNX18Q96RF0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX18Q96RF0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNX18Q96RF0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX18Q96RF0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX18Q96RF0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX18Q96RF0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX18Q96RF0 AL162727.3-201ENST00000635661 2787 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms