Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
FGD4Q96M96 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.59■□□□□ 0.89
FGD4Q96M96 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
FGD4Q96M96 LINC00602-201ENST00000629776 2065 ntBASIC20.58■□□□□ 0.89
FGD4Q96M96 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.58■□□□□ 0.89
FGD4Q96M96 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FGD4Q96M96 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FGD4Q96M96 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
FGD4Q96M96 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
FGD4Q96M96 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FGD4Q96M96 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
FGD4Q96M96 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FGD4Q96M96 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
FGD4Q96M96 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FGD4Q96M96 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
FGD4Q96M96 AC006538.3-201ENST00000612495 578 ntBASIC20.58■□□□□ 0.89
FGD4Q96M96 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.58■□□□□ 0.89
FGD4Q96M96 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
FGD4Q96M96 INTS4P1-201ENST00000438455 1935 ntBASIC20.58■□□□□ 0.88
FGD4Q96M96 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.58■□□□□ 0.88
FGD4Q96M96 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
FGD4Q96M96 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
FGD4Q96M96 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.58■□□□□ 0.88
FGD4Q96M96 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.58■□□□□ 0.88
FGD4Q96M96 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.57■□□□□ 0.88
FGD4Q96M96 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
FGD4Q96M96 AC005082.1-201ENST00000413042 2259 ntBASIC20.57■□□□□ 0.88
FGD4Q96M96 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
FGD4Q96M96 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
FGD4Q96M96 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FGD4Q96M96 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FGD4Q96M96 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
FGD4Q96M96 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
FGD4Q96M96 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FGD4Q96M96 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FGD4Q96M96 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.57■□□□□ 0.88
FGD4Q96M96 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FGD4Q96M96 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FGD4Q96M96 AC125634.1-201ENST00000438758 1403 ntBASIC20.57■□□□□ 0.88
FGD4Q96M96 HNRNPDP1-201ENST00000439535 754 ntBASIC20.57■□□□□ 0.88
FGD4Q96M96 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.57■□□□□ 0.88
FGD4Q96M96 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FGD4Q96M96 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
FGD4Q96M96 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.57■□□□□ 0.88
FGD4Q96M96 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.57■□□□□ 0.88
FGD4Q96M96 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.57■□□□□ 0.88
FGD4Q96M96 AC064862.7-201ENST00000604520 867 ntBASIC20.57■□□□□ 0.88
FGD4Q96M96 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.57■□□□□ 0.88
FGD4Q96M96 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FGD4Q96M96 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FGD4Q96M96 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
FGD4Q96M96 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
FGD4Q96M96 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FGD4Q96M96 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FGD4Q96M96 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FGD4Q96M96 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FGD4Q96M96 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.56■□□□□ 0.88
FGD4Q96M96 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
FGD4Q96M96 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.56■□□□□ 0.88
FGD4Q96M96 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FGD4Q96M96 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FGD4Q96M96 MIR574-201ENST00000385209 96 ntBASIC20.56■□□□□ 0.88
FGD4Q96M96 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.56■□□□□ 0.88
FGD4Q96M96 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.56■□□□□ 0.88
FGD4Q96M96 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
FGD4Q96M96 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FGD4Q96M96 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.56■□□□□ 0.88
FGD4Q96M96 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.56■□□□□ 0.88
FGD4Q96M96 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FGD4Q96M96 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.56■□□□□ 0.88
FGD4Q96M96 AC011467.2-201ENST00000598425 242 ntBASIC20.56■□□□□ 0.88
FGD4Q96M96 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.56■□□□□ 0.88
FGD4Q96M96 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FGD4Q96M96 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.56■□□□□ 0.88
FGD4Q96M96 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
FGD4Q96M96 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.56■□□□□ 0.88
FGD4Q96M96 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FGD4Q96M96 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
FGD4Q96M96 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FGD4Q96M96 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FGD4Q96M96 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.56■□□□□ 0.88
FGD4Q96M96 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FGD4Q96M96 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.55■□□□□ 0.88
FGD4Q96M96 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
FGD4Q96M96 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FGD4Q96M96 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FGD4Q96M96 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FGD4Q96M96 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FGD4Q96M96 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.55■□□□□ 0.88
FGD4Q96M96 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.55■□□□□ 0.88
FGD4Q96M96 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.55■□□□□ 0.88
FGD4Q96M96 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.55■□□□□ 0.88
FGD4Q96M96 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.55■□□□□ 0.88
FGD4Q96M96 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.55■□□□□ 0.88
FGD4Q96M96 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.55■□□□□ 0.88
FGD4Q96M96 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FGD4Q96M96 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.55■□□□□ 0.88
FGD4Q96M96 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.55■□□□□ 0.88
FGD4Q96M96 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.55■□□□□ 0.88
FGD4Q96M96 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms