Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
NBPF4Q96M43 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
NBPF4Q96M43 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
NBPF4Q96M43 AC025062.2-201ENST00000605477 670 ntBASIC23.91■■□□□ 1.42
NBPF4Q96M43 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC23.91■■□□□ 1.42
NBPF4Q96M43 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC23.91■■□□□ 1.42
NBPF4Q96M43 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
NBPF4Q96M43 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NBPF4Q96M43 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
NBPF4Q96M43 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NBPF4Q96M43 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NBPF4Q96M43 PMS2P7-201ENST00000506558 1336 ntBASIC23.9■■□□□ 1.42
NBPF4Q96M43 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
NBPF4Q96M43 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NBPF4Q96M43 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
NBPF4Q96M43 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
NBPF4Q96M43 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC23.9■■□□□ 1.42
NBPF4Q96M43 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC23.9■■□□□ 1.42
NBPF4Q96M43 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.9■■□□□ 1.42
NBPF4Q96M43 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC23.9■■□□□ 1.42
NBPF4Q96M43 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
NBPF4Q96M43 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
NBPF4Q96M43 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
NBPF4Q96M43 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
NBPF4Q96M43 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
NBPF4Q96M43 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
NBPF4Q96M43 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC23.89■■□□□ 1.42
NBPF4Q96M43 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
NBPF4Q96M43 AL356309.3-201ENST00000624132 1934 ntBASIC23.89■■□□□ 1.42
NBPF4Q96M43 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
NBPF4Q96M43 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC23.89■■□□□ 1.41
NBPF4Q96M43 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
NBPF4Q96M43 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC23.89■■□□□ 1.41
NBPF4Q96M43 CD63-204ENST00000546939 779 ntTSL 3 BASIC23.89■■□□□ 1.41
NBPF4Q96M43 AC145285.3-201ENST00000564603 959 ntBASIC23.89■■□□□ 1.41
NBPF4Q96M43 PNMT-203ENST00000581428 677 ntTSL 2 BASIC23.89■■□□□ 1.41
NBPF4Q96M43 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC23.89■■□□□ 1.41
NBPF4Q96M43 TERC-201ENST00000602385 541 ntBASIC23.89■■□□□ 1.41
NBPF4Q96M43 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
NBPF4Q96M43 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
NBPF4Q96M43 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
NBPF4Q96M43 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
NBPF4Q96M43 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.89■■□□□ 1.41
NBPF4Q96M43 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NBPF4Q96M43 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NBPF4Q96M43 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NBPF4Q96M43 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NBPF4Q96M43 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
NBPF4Q96M43 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC23.88■■□□□ 1.41
NBPF4Q96M43 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC23.88■■□□□ 1.41
NBPF4Q96M43 PGAM5P1-201ENST00000518923 814 ntBASIC23.88■■□□□ 1.41
NBPF4Q96M43 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
NBPF4Q96M43 AC092865.5-201ENST00000545435 363 ntBASIC23.88■■□□□ 1.41
NBPF4Q96M43 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NBPF4Q96M43 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC23.88■■□□□ 1.41
NBPF4Q96M43 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC23.88■■□□□ 1.41
NBPF4Q96M43 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC23.88■■□□□ 1.41
NBPF4Q96M43 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC23.88■■□□□ 1.41
NBPF4Q96M43 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
NBPF4Q96M43 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NBPF4Q96M43 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC23.88■■□□□ 1.41
NBPF4Q96M43 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NBPF4Q96M43 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC23.88■■□□□ 1.41
NBPF4Q96M43 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF4Q96M43 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF4Q96M43 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF4Q96M43 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
NBPF4Q96M43 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF4Q96M43 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC23.87■■□□□ 1.41
NBPF4Q96M43 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC23.87■■□□□ 1.41
NBPF4Q96M43 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF4Q96M43 RPS2P28-201ENST00000314255 741 ntBASIC23.87■■□□□ 1.41
NBPF4Q96M43 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF4Q96M43 COX10-202ENST00000429152 875 ntTSL 2 BASIC23.87■■□□□ 1.41
NBPF4Q96M43 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF4Q96M43 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF4Q96M43 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF4Q96M43 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.87■■□□□ 1.41
NBPF4Q96M43 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF4Q96M43 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF4Q96M43 ZNF259P1-201ENST00000407656 1365 ntBASIC23.87■■□□□ 1.41
NBPF4Q96M43 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF4Q96M43 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NBPF4Q96M43 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
NBPF4Q96M43 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NBPF4Q96M43 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
NBPF4Q96M43 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.86■■□□□ 1.41
NBPF4Q96M43 AC104109.2-201ENST00000602919 1418 ntBASIC23.86■■□□□ 1.41
NBPF4Q96M43 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NBPF4Q96M43 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC23.86■■□□□ 1.41
NBPF4Q96M43 NKAPP1-205ENST00000585790 367 ntBASIC23.86■■□□□ 1.41
NBPF4Q96M43 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC23.86■■□□□ 1.41
NBPF4Q96M43 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
NBPF4Q96M43 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NBPF4Q96M43 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC23.86■■□□□ 1.41
NBPF4Q96M43 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NBPF4Q96M43 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NBPF4Q96M43 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
NBPF4Q96M43 SLC25A24-204ENST00000569674 2357 ntBASIC23.86■■□□□ 1.41
NBPF4Q96M43 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms