Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX27Q96L92 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX27Q96L92 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNX27Q96L92 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SNX27Q96L92 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.6■□□□□ 0.73
SNX27Q96L92 AC104819.1-201ENST00000504587 486 ntBASIC19.6■□□□□ 0.73
SNX27Q96L92 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.6■□□□□ 0.73
SNX27Q96L92 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.6■□□□□ 0.73
SNX27Q96L92 AC074051.2-201ENST00000565115 352 ntBASIC19.6■□□□□ 0.73
SNX27Q96L92 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX27Q96L92 AL139424.1-201ENST00000607572 797 ntBASIC19.6■□□□□ 0.73
SNX27Q96L92 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNX27Q96L92 AC009154.2-201ENST00000621177 724 ntBASIC19.6■□□□□ 0.73
SNX27Q96L92 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.6■□□□□ 0.73
SNX27Q96L92 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX27Q96L92 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.6■□□□□ 0.73
SNX27Q96L92 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.6■□□□□ 0.73
SNX27Q96L92 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
SNX27Q96L92 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.6■□□□□ 0.73
SNX27Q96L92 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNX27Q96L92 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX27Q96L92 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.59■□□□□ 0.73
SNX27Q96L92 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.59■□□□□ 0.73
SNX27Q96L92 AIRN-201ENST00000601203 4374 ntBASIC19.59■□□□□ 0.73
SNX27Q96L92 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNX27Q96L92 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
SNX27Q96L92 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX27Q96L92 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX27Q96L92 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SNX27Q96L92 IGHV3-47-201ENST00000425060 335 ntBASIC19.59■□□□□ 0.73
SNX27Q96L92 VENTXP7-201ENST00000475503 772 ntBASIC19.59■□□□□ 0.73
SNX27Q96L92 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.59■□□□□ 0.73
SNX27Q96L92 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.59■□□□□ 0.73
SNX27Q96L92 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.59■□□□□ 0.73
SNX27Q96L92 AC011840.4-201ENST00000578471 627 ntBASIC19.59■□□□□ 0.73
SNX27Q96L92 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
SNX27Q96L92 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNX27Q96L92 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.59■□□□□ 0.73
SNX27Q96L92 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX27Q96L92 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.59■□□□□ 0.73
SNX27Q96L92 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX27Q96L92 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.59■□□□□ 0.73
SNX27Q96L92 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.59■□□□□ 0.73
SNX27Q96L92 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNX27Q96L92 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNX27Q96L92 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SNX27Q96L92 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
SNX27Q96L92 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX27Q96L92 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SNX27Q96L92 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX27Q96L92 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.58■□□□□ 0.73
SNX27Q96L92 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SNX27Q96L92 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNX27Q96L92 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
SNX27Q96L92 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX27Q96L92 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SNX27Q96L92 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX27Q96L92 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNX27Q96L92 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.58■□□□□ 0.72
SNX27Q96L92 AC068472.1-201ENST00000474589 881 ntBASIC19.58■□□□□ 0.72
SNX27Q96L92 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX27Q96L92 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.58■□□□□ 0.72
SNX27Q96L92 AC239800.4-201ENST00000603712 296 ntBASIC19.58■□□□□ 0.72
SNX27Q96L92 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.58■□□□□ 0.72
SNX27Q96L92 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX27Q96L92 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX27Q96L92 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX27Q96L92 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX27Q96L92 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX27Q96L92 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX27Q96L92 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.57■□□□□ 0.72
SNX27Q96L92 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX27Q96L92 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
SNX27Q96L92 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX27Q96L92 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.57■□□□□ 0.72
SNX27Q96L92 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNX27Q96L92 AC132938.6-201ENST00000623828 1655 ntBASIC19.57■□□□□ 0.72
SNX27Q96L92 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX27Q96L92 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
SNX27Q96L92 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX27Q96L92 KRT18P65-201ENST00000439811 1286 ntBASIC19.57■□□□□ 0.72
SNX27Q96L92 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.57■□□□□ 0.72
SNX27Q96L92 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.57■□□□□ 0.72
SNX27Q96L92 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNX27Q96L92 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.57■□□□□ 0.72
SNX27Q96L92 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX27Q96L92 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNX27Q96L92 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.57■□□□□ 0.72
SNX27Q96L92 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.57■□□□□ 0.72
SNX27Q96L92 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.57■□□□□ 0.72
SNX27Q96L92 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX27Q96L92 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNX27Q96L92 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
SNX27Q96L92 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNX27Q96L92 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX27Q96L92 NSUN5P1-202ENST00000421140 1535 ntBASIC19.56■□□□□ 0.72
SNX27Q96L92 NSUN5P2-203ENST00000457352 1529 ntBASIC19.56■□□□□ 0.72
SNX27Q96L92 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SNX27Q96L92 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX27Q96L92 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms