Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALR3Q96L12 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CALR3Q96L12 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.28■□□□□ 0.68
CALR3Q96L12 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CALR3Q96L12 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALR3Q96L12 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALR3Q96L12 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALR3Q96L12 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CALR3Q96L12 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CALR3Q96L12 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CALR3Q96L12 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.27■□□□□ 0.68
CALR3Q96L12 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CALR3Q96L12 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CALR3Q96L12 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.27■□□□□ 0.68
CALR3Q96L12 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CALR3Q96L12 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CALR3Q96L12 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CALR3Q96L12 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CALR3Q96L12 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CALR3Q96L12 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CALR3Q96L12 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CALR3Q96L12 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.27■□□□□ 0.68
CALR3Q96L12 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CALR3Q96L12 AL355355.2-201ENST00000442321 338 ntBASIC19.27■□□□□ 0.68
CALR3Q96L12 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.27■□□□□ 0.68
CALR3Q96L12 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.27■□□□□ 0.68
CALR3Q96L12 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.27■□□□□ 0.68
CALR3Q96L12 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.27■□□□□ 0.68
CALR3Q96L12 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.27■□□□□ 0.68
CALR3Q96L12 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CALR3Q96L12 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CALR3Q96L12 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CALR3Q96L12 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CALR3Q96L12 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CALR3Q96L12 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.26■□□□□ 0.67
CALR3Q96L12 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.26■□□□□ 0.67
CALR3Q96L12 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CALR3Q96L12 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CALR3Q96L12 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CALR3Q96L12 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CALR3Q96L12 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.26■□□□□ 0.67
CALR3Q96L12 CCR12P-201ENST00000446203 998 ntBASIC19.26■□□□□ 0.67
CALR3Q96L12 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.26■□□□□ 0.67
CALR3Q96L12 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.26■□□□□ 0.67
CALR3Q96L12 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CALR3Q96L12 AC008687.5-201ENST00000593746 558 ntBASIC19.26■□□□□ 0.67
CALR3Q96L12 AL049637.2-201ENST00000641778 930 ntBASIC19.26■□□□□ 0.67
CALR3Q96L12 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.26■□□□□ 0.67
CALR3Q96L12 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CALR3Q96L12 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.26■□□□□ 0.67
CALR3Q96L12 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CALR3Q96L12 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.26■□□□□ 0.67
CALR3Q96L12 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CALR3Q96L12 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CALR3Q96L12 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.26■□□□□ 0.67
CALR3Q96L12 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CALR3Q96L12 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CALR3Q96L12 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CALR3Q96L12 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CALR3Q96L12 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CALR3Q96L12 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.25■□□□□ 0.67
CALR3Q96L12 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.25■□□□□ 0.67
CALR3Q96L12 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.25■□□□□ 0.67
CALR3Q96L12 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.25■□□□□ 0.67
CALR3Q96L12 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CALR3Q96L12 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CALR3Q96L12 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.25■□□□□ 0.67
CALR3Q96L12 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 AC113410.3-201ENST00000623366 203 ntBASIC19.25■□□□□ 0.67
CALR3Q96L12 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CALR3Q96L12 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CALR3Q96L12 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CALR3Q96L12 AL645608.8-201ENST00000606034 2086 ntBASIC19.24■□□□□ 0.67
CALR3Q96L12 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.24■□□□□ 0.67
CALR3Q96L12 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CALR3Q96L12 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CALR3Q96L12 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CALR3Q96L12 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CALR3Q96L12 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CALR3Q96L12 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms