Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 KRT18P2-201ENST00000447938 1258 ntBASIC15.41■□□□□ 0.06
SPG11Q96JI7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 RNA5SP416-201ENST00000516838 111 ntBASIC15.41■□□□□ 0.06
SPG11Q96JI7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPG11Q96JI7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPG11Q96JI7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.4■□□□□ 0.06
SPG11Q96JI7 AL158211.5-201ENST00000623583 2518 ntBASIC15.4■□□□□ 0.06
SPG11Q96JI7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SPG11Q96JI7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SPG11Q96JI7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPG11Q96JI7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SPG11Q96JI7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.4■□□□□ 0.06
SPG11Q96JI7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPG11Q96JI7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.4■□□□□ 0.06
SPG11Q96JI7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SPG11Q96JI7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.4■□□□□ 0.06
SPG11Q96JI7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
SPG11Q96JI7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.4■□□□□ 0.06
SPG11Q96JI7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SPG11Q96JI7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.4■□□□□ 0.06
SPG11Q96JI7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPG11Q96JI7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SPG11Q96JI7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPG11Q96JI7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPG11Q96JI7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SPG11Q96JI7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPG11Q96JI7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPG11Q96JI7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.4■□□□□ 0.06
SPG11Q96JI7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
SPG11Q96JI7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
SPG11Q96JI7 FEM1AP3-201ENST00000403722 1741 ntBASIC15.4■□□□□ 0.06
SPG11Q96JI7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SPG11Q96JI7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SPG11Q96JI7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SPG11Q96JI7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SPG11Q96JI7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SPG11Q96JI7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SPG11Q96JI7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SPG11Q96JI7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SPG11Q96JI7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SPG11Q96JI7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SPG11Q96JI7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SPG11Q96JI7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SPG11Q96JI7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SPG11Q96JI7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SPG11Q96JI7 AC005082.1-201ENST00000413042 2259 ntBASIC15.39■□□□□ 0.05
SPG11Q96JI7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SPG11Q96JI7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.38■□□□□ 0.05
SPG11Q96JI7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SPG11Q96JI7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPG11Q96JI7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPG11Q96JI7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SPG11Q96JI7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SPG11Q96JI7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SPG11Q96JI7 LAGE3P1-201ENST00000425356 484 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms