Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFT43Q96FT9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
IFT43Q96FT9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFT43Q96FT9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
IFT43Q96FT9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFT43Q96FT9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFT43Q96FT9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFT43Q96FT9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFT43Q96FT9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
IFT43Q96FT9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFT43Q96FT9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IFT43Q96FT9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFT43Q96FT9 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFT43Q96FT9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.77■□□□□ 0.6
IFT43Q96FT9 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFT43Q96FT9 AP000593.1-201ENST00000393668 712 ntBASIC18.77■□□□□ 0.6
IFT43Q96FT9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.77■□□□□ 0.6
IFT43Q96FT9 KRT18P23-201ENST00000435622 1283 ntBASIC18.77■□□□□ 0.6
IFT43Q96FT9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFT43Q96FT9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFT43Q96FT9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.77■□□□□ 0.6
IFT43Q96FT9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.77■□□□□ 0.6
IFT43Q96FT9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.77■□□□□ 0.6
IFT43Q96FT9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.77■□□□□ 0.6
IFT43Q96FT9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFT43Q96FT9 AC099398.1-201ENST00000567919 2776 ntBASIC18.77■□□□□ 0.6
IFT43Q96FT9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFT43Q96FT9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IFT43Q96FT9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.77■□□□□ 0.6
IFT43Q96FT9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.77■□□□□ 0.6
IFT43Q96FT9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.77■□□□□ 0.59
IFT43Q96FT9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFT43Q96FT9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.76■□□□□ 0.59
IFT43Q96FT9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFT43Q96FT9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFT43Q96FT9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.76■□□□□ 0.59
IFT43Q96FT9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IFT43Q96FT9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IFT43Q96FT9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.76■□□□□ 0.59
IFT43Q96FT9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFT43Q96FT9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFT43Q96FT9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFT43Q96FT9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.76■□□□□ 0.59
IFT43Q96FT9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFT43Q96FT9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.76■□□□□ 0.59
IFT43Q96FT9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.76■□□□□ 0.59
IFT43Q96FT9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFT43Q96FT9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFT43Q96FT9 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFT43Q96FT9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.76■□□□□ 0.59
IFT43Q96FT9 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.76■□□□□ 0.59
IFT43Q96FT9 KRT18P41-201ENST00000518924 1277 ntBASIC18.76■□□□□ 0.59
IFT43Q96FT9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.76■□□□□ 0.59
IFT43Q96FT9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.76■□□□□ 0.59
IFT43Q96FT9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.76■□□□□ 0.59
IFT43Q96FT9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFT43Q96FT9 AP000550.4-202ENST00000639755 178 ntBASIC18.76■□□□□ 0.59
IFT43Q96FT9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.76■□□□□ 0.59
IFT43Q96FT9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IFT43Q96FT9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.76■□□□□ 0.59
IFT43Q96FT9 MYLKP1-201ENST00000509077 1580 ntBASIC18.76■□□□□ 0.59
IFT43Q96FT9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFT43Q96FT9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.76■□□□□ 0.59
IFT43Q96FT9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.76■□□□□ 0.59
IFT43Q96FT9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IFT43Q96FT9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFT43Q96FT9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
IFT43Q96FT9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.75■□□□□ 0.59
IFT43Q96FT9 AL441883.1-201ENST00000566170 1045 ntBASIC18.75■□□□□ 0.59
IFT43Q96FT9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
IFT43Q96FT9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
IFT43Q96FT9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
IFT43Q96FT9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.75■□□□□ 0.59
IFT43Q96FT9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
IFT43Q96FT9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IFT43Q96FT9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IFT43Q96FT9 KRT8P7-201ENST00000533003 1432 ntBASIC18.74■□□□□ 0.59
IFT43Q96FT9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IFT43Q96FT9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IFT43Q96FT9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
IFT43Q96FT9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms