Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 AL096828.2-201ENST00000567259 1965 ntBASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ECHDC3Q96DC8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 AL020996.1-203ENST00000536896 2307 ntBASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 HCG4P8-203ENST00000443049 980 ntBASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 AC068472.1-201ENST00000474589 881 ntBASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 AC092329.2-201ENST00000598402 547 ntBASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 AC124864.1-201ENST00000623408 392 ntBASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ECHDC3Q96DC8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 DUTP2-201ENST00000519164 463 ntBASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ECHDC3Q96DC8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 AC246785.2-201ENST00000432512 513 ntBASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms